Clostridioides difficile CD196: CD196_1879
Help
Entry
CD196_1879 CDS
T00997
Name
(GenBank) AraC-family transcriptional regulator
Organism
cdc
Clostridioides difficile CD196
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
PocR
HTH_AraC
Cupin_2
AraC_binding
Polysacc_synt_C
GPI
MannoseP_isomer
Cupin_1
Motif
Other DBs
NCBI-ProteinID:
CBA63591
UniProt:
A0A0H3N821
LinkDB
All DBs
Position
complement(2164151..2165806)
Genome browser
AA seq
551 aa
AA seq
DB search
MVDFIESNNEVQKFDWGEVMWIHEPSKTQFNRLSAGIVRFFPGNCQEKHFHLSEEQLLYV
IQGEGIQMIDGKKVNIKETSIVYCPPYSEHEIINTGKIDLVILITYVPHKFSSLRQIPIV
FSENNIQELVNVNIIENLANQISNILKLRISVYDLKYKGIFETKKENKFCDICKNIKPCT
KKLVKSINNDNFEKVYHCEYGVSSLEIPIVLEENIVGYIECGNFIVYKSIDIDKNLSELS
SSSGIDIKYINKIYNEFPLNPKSRLYVLKENLLMMSEFIQEIAKRNFFENQLSIKDEEIL
KSRKENIRLEEALKKANSRLLEEEYIINPIDMFNNSSKEYPFELELYIEKEIKNMNLEGV
YNLIDTNKLRYNDVRDTIQEMIFVLSRTVLRDLEDLKLISYLRNKYNKKISLVDSDEDLW
NVLFEFSKECIDKNRAFWRKDKGNLIENINEYIKKYYKENINLNSISDVFFISPNYLSSI
FNERNKVSITEYINLLRIEESKKYLLDRSMSISDICKKVGFNNSSYFSQIFKKFNSITPN
EYRKNMLDNKY
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atggtggattttattgagtcaaataatgaagtacaaaaatttgattggggagaggttatg
tggatacacgaaccatcaaaaacacaattcaatagacttagtgctggaattgtaagattt
tttccgggaaactgccaagaaaagcattttcatttaagtgaagaacagcttttatatgtg
attcagggagaaggaatacaaatgattgatggtaaaaaggtcaatataaaggaaacatct
atagtttattgcccaccatattcagaacatgaaattataaacactggtaaaattgattta
gtaatattaattacttatgttcctcataaattttcgagtttgagacaaatacctatagta
ttttctgaaaacaatatacaagagttagttaatgtaaacataattgaaaatcttgcaaat
caaatatctaatatattgaagcttagaatatctgtatatgacttaaagtataaaggaata
tttgagactaagaaagaaaataaattttgcgatatttgtaaaaatataaaaccgtgtact
aaaaaacttgttaaaagcataaataatgataactttgaaaaagtgtaccattgtgagtat
ggtgtttccagtttagagatacctatagtattagaagaaaatatagttggatatatagaa
tgtggtaattttatagtatataagtctattgatatagataaaaatttatctgaattatca
agtagttctggtattgatataaaatacataaacaaaatttacaatgaatttccattaaat
cctaaaagtagattatatgtattaaaagaaaatttattaatgatgtctgaatttattcag
gaaatagctaagaggaatttttttgaaaatcaacttagtataaaagatgaggagatatta
aagagtagaaaagaaaatataagacttgaagaggcacttaaaaaagcaaatagtagatta
ttagaagaagagtatattattaatccgatagatatgttcaataattcttcaaaagaatat
ccctttgaattagaactttatattgaaaaagaaattaaaaatatgaatttagaaggtgtt
tataatctaatagatacaaacaaattaagatataatgatgttagagatactattcaggaa
atgatatttgtattgtctagaacagtgcttagagatttagaggatttaaaacttatatct
tatttaagaaataaatataataaaaaaatatcacttgtagacagtgatgaagatttatgg
aatgtattatttgaattttccaaagagtgtattgataagaatagagcattttggagaaaa
gataaaggaaatctaattgaaaatataaacgaatatataaaaaaatattataaagaaaat
ataaatttgaatagtatatcagatgttttttttataagtccaaattatttgagttctatt
tttaatgaaagaaataaagtttcaataactgagtatataaatcttcttaggatagaagaa
tctaaaaaatatctgttagatagaagcatgagtattagtgatatttgtaagaaagtaggt
tttaataacagtagttatttttcacaaatatttaagaagtttaatagtataactccaaat
gaatatagaaagaatatgctggataataagtattaa
DBGET
integrated database retrieval system
