Clostridioides difficile CD196: CD196_2074
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Entry
CD196_2074 CDS
T00997
Name
(GenBank) ABC transporter, ATP-binding/permease protein
KO
K18888
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
cdc
Clostridioides difficile CD196
Pathway
cdc02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cdc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CD196_2074
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cdc02000
]
CD196_2074
Transporters [BR:
cdc02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
CD196_2074
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
AAA_21
AAA_22
AAA
AAA_15
EI24
SMC_N
DUF87
Rad17
ABC_membrane_2
AAA_30
Zeta_toxin
ABC_membrane_3
AAA_14
AAA_5
nSTAND3
AAA_23
DEAD
TsaE
AAA_24
DUF5906
AAA_18
AAA_16
AAA_29
AAA_7
ResIII
LntA_helical
AAA_28
DO-GTPase2
Orf78
Motif
Other DBs
NCBI-ProteinID:
CBA63978
UniProt:
A0A0H3N8G3
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Position
complement(2402742..2404565)
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AA seq
607 aa
AA seq
DB search
MGRGPMGKSMEAGQKANDFKGTMRKLIAYLSKFKISIILVIVFAIGSASFSIVGPKILGK
ATTKIFEGLVSKVSGGNVGIDFNAIGKILTFLLFLYLISALFSFIQGFIMSGISQKVSYN
LRKEISAKLDRLPMKYFDTKTHGEILSRITNDIDTLNQSLNQSMTQLITSVTTMIGVLIM
MLSISGIMTLVAVLILPISMFVISRIIKKSQKYFRYQQEYLGNVNGQVEETYSGQTIVKA
FNREDEVIEEFDKLNDSLYNSAWKSQFLSGIMQPLMMFIGNLGYVMVSILGGWLAIKKTI
EVGDIQSFIQYVRNFTQPMTQIAQVANLLQSTAAASERVFEFLEEEEEVQIVENAVSIDG
LEGKIDFENVNFGYNPNKTIINDFSVNVKPGQKVAIVGPTGAGKTTIVKLLMRFYDVNSG
SILIDGHNIKDFNRSELREMFGMVLQDTWLFSGSIMENIRYGKLNATDEEVIEAAKSAHV
HRFIKTLPDGYKMKLNEEASNVSQGQKQLLTIARAILADPKILILDEATSSVDTRTEVLI
QKAMDNLMEGRTSFVIAHRLSTIRDADMILVMNEGDIVEQGNHEELLKKGGFYANLYNSQ
FEEDEAM
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgggaagaggtcctatgggaaaatctatggaagcaggacaaaaagcaaatgactttaaa
gggactatgcgaaaactaattgcatatttatctaaatttaaaatatcaataattttagta
attgtatttgctattggtagtgcatcgttttctatagtaggtccaaaaattttaggaaag
gcaactacaaagatatttgaagggttagtgagtaaagtttctggaggaaacgtaggtata
gattttaatgcaattggaaaaatcttaacctttttacttttcctttatttgataagtgca
ctgttctcttttatacaaggatttataatgagtggaatttctcaaaaagtatcctataat
ttaagaaaagagatttcagcaaaattggatagattaccaatgaagtattttgatactaag
acgcatggtgaaatattatcgagaattacgaatgatatagatactttaaatcaaagttta
aatcaaagtatgacacagcttataacatcagtaacaactatgataggtgttttgataatg
atgttatctataagtggaattatgacattagtggcagttttaatattaccaatatcaatg
tttgtaatttcaagaataataaagaaatcacaaaaatactttagatatcaacaagaatat
ttaggaaatgtaaatggtcaagttgaggaaacttatagtggccaaacaatagtgaaagca
tttaatcgtgaagatgaagtaattgaagagtttgataaactaaatgatagcctgtataat
tcagcgtggaaatctcaatttttatcaggtataatgcaaccacttatgatgtttattgga
aacttgggatatgtaatggtatcaatcttaggaggttggcttgcaattaagaaaacaatt
gaggttggtgacatacagtcatttatacaatatgtaagaaactttacacagccaatgact
cagattgcacaggttgccaatttattgcaatcaacagcagcagcttctgaaagagtattt
gagtttttagaagaggaagaagaagtccaaattgttgaaaatgcagtttcaatagatggt
ttagaaggtaaaattgattttgaaaatgtcaactttggatataacccaaacaagactata
ataaatgatttctcagtaaatgttaaacctggtcaaaaagttgctattgttggacctaca
ggagcaggtaaaactacaatagttaaactgttaatgagattttatgatgttaatagcggt
tcaatactgattgatggtcataatattaaagattttaatcgtagtgagcttagagaaatg
tttggtatggttcttcaagatacatggttatttagtggttcaattatggaaaatataaga
tatggtaagttgaatgctacagatgaagaagttatagaggctgctaaatctgcacatgtt
catagatttattaagacgttaccagatggatataagatgaaattaaatgaagaagcaagt
aatgtttctcaaggtcaaaaacaattattgactatagctcgtgctattttagctgatcct
aaaattttaatattagatgaagctacaagttctgtcgatactagaacagaagtattgatt
caaaaagctatggataatcttatggaaggtagaacaagttttgttatagcccacagatta
tcaactatacgtgatgctgatatgattcttgtaatgaatgaaggagatatagttgaacaa
ggaaatcatgaggaacttctaaagaaaggcggattctatgccaatctttacaattctcaa
tttgaagaagatgaagcaatgtaa
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