Clostridioides difficile CD196: CD196_2130
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Entry
CD196_2130 CDS
T00997
Name
(GenBank) putative DNA topoisomerase
KO
K03169
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
cdc
Clostridioides difficile CD196
Brite
KEGG Orthology (KO) [BR:
cdc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cdc03032
]
CD196_2130
Enzymes [BR:
cdc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CD196_2130
DNA replication proteins [BR:
cdc03032
]
Prokaryotic type
DNA Topoisomerases
CD196_2130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Zn_ribbon_HMPTM
Toprim_4
DNA_ligase_ZBD
zf-DNA_Pol
Zn_ribbon_Top1
Motif
Other DBs
NCBI-ProteinID:
CBA64083
UniProt:
A0A0H3N8M1
LinkDB
All DBs
Position
complement(2473840..2475960)
Genome browser
AA seq
706 aa
AA seq
DB search
MGKILVLAEKPSVGRDIAKVLGSKNEKNGYIEGPKYVITWALGHLVTLADPESYGERYKS
WSLEDLPILPKHLKTVVIKKSGKQFNTVKSQMNRNDIDEIVIATDAGREGELVARWIIEK
SQVKKPIKRLWISSSTDKAIKDGFAKLRSGKEYENLYYSAIARAEADWIIGINATRALTT
KYNAQLSCGRVQTPTLAMLLKREEEIRNFKPKEYYGLELIATKGNSDIKFIWNDKNNNSS
TFSKEKIESILKKVKGVDIKISEVNKSYKKKYSPALYDLTELQRDANKMFGFSAKETLSI
MQKLYEHHKVLTYPRTDSRYLTSDIVGTLKDRIKAVNISDYSKICNKLLKSNIIANKSFV
DNSKVTDHHAIIPTEQKVFMSDFSDKERKIYNLVVKRFLAVLSPPFEYEQTTISATVEGE
IFKAKGNKVINLGWKESYKDIEDEDEYESIPNVLEKDVLKVKGLKITSGKTNPPPYLNEG
TLLTAMEKNGLGTVATRADIIEKLFNSFLMEKKNKEIYITSKGRQLLDLVPVDLKTPELT
ASWEKKLLDISKGKLSKNTFINDMKDYSKDIVLEVKNSDNKFKHDNLTKNRCPECGKFML
EVNGKKGKMLICEDRECNTRKTISQVTNSRCPNCHKKLELRGEGEGRIFTCSCGYREKLS
SFNKRKQEEKQKASKKDVNQYLKNQNKNQETFNNPFAEALAKLKNK
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaaatattagtgctagcagaaaaaccttctgttggaagagatatagcaaaagtt
ttagggtcaaaaaatgaaaaaaatggttatatagaggggccaaagtatgtgataacttgg
gcactaggtcatttggttacacttgctgaccccgaaagttatggagaaagatataaatca
tggagcttagaagacctgccaatacttcccaagcaccttaagactgttgtaataaaaaag
agtggaaagcagtttaatacagttaaatcgcaaatgaatagaaatgatatagatgaaata
gttatagcaacagatgcaggtcgtgaaggagaacttgtagcaaggtggataatagaaaaa
tcacaggtaaaaaaacctataaaacgtctttggatttcttcaagtacagacaaagcaata
aaagacggatttgcaaaattaagaagtggaaaagaatatgaaaatttgtattactcagca
atagcacgagcagaagctgattggattattggaataaatgcaaccagagctttgacaaca
aagtacaatgcacagctttcttgtggaagagtacaaactcctactcttgcaatgttgctt
aaaagagaagaagaaataagaaatttcaaacctaaagagtattatggattagaattaatt
gctacaaagggaaattcagatataaaatttatttggaatgataaaaacaataattcttca
acttttagtaaagaaaagatagaatccatattaaaaaaagtaaaaggtgtagacataaaa
atatctgaagtaaacaagtcatataagaaaaaatattcacctgcactctatgatttaaca
gaattacaaagagatgcaaataaaatgtttggattttcagcaaaagaaactttatctata
atgcaaaaactgtatgaacatcataaagtacttacttatcctagaactgattctagatat
ttaacatcagatattgttggaacattaaaagatagaataaaagctgtaaatattagtgat
tattcaaagatttgtaataaattattaaaaagcaatattatagctaataaatcgtttgtt
gacaattcaaaggtaacagaccaccatgcaataataccaacagaacagaaggtattcatg
agtgattttagtgacaaagagcgaaaaatatataatcttgtagtaaaaagatttttagca
gtactatctcctccttttgaatatgagcagacaactataagtgcaactgtagaaggagaa
atatttaaggctaagggaaacaaagtaataaatttaggttggaaagaaagttataaagat
attgaagatgaagatgagtatgaaagtataccaaatgttttagaaaaagatgtacttaag
gtcaagggattaaagataacttcaggaaaaacaaatccaccaccatacttaaatgaggga
acattattgactgctatggaaaagaatggtctagggacagttgctacaagagcagatata
atagaaaaattattcaattcatttttaatggaaaagaaaaataaagagatatatataaca
tcaaaaggaagacaattattagatttagttccagtagacttaaagacaccagaacttaca
gcttcatgggaaaagaaattattggatatttcaaagggaaaacttagtaaaaatacattc
ataaatgacatgaaagattattcaaaagatattgtactagaagtaaaaaatagtgataat
aaatttaaacatgataacttaactaaaaatagatgtccagaatgtggtaaatttatgtta
gaggtaaatggtaaaaaaggtaagatgttgatttgtgaagatagagagtgtaatactaga
aaaactatatcacaagtaaccaattcaagatgtcctaactgtcataaaaaattagaactt
cgtggagaaggtgaggggagaatcttcacttgtagttgcggatacagagaaaagttgtct
tctttcaacaagagaaagcaagaagaaaaacagaaggcatcaaaaaaagatgttaatcaa
tatttaaaaaatcaaaataaaaatcaagagacatttaataatccatttgcagaagcatta
gctaagctaaaaaacaaataa
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