Clostridioides difficile CD196: CD196_2237
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Entry
CD196_2237 CDS
T00997
Name
(GenBank) putative DNA polymerase III, epsilon chain
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
cdc
Clostridioides difficile CD196
Pathway
cdc03030
DNA replication
cdc03430
Mismatch repair
cdc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cdc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CD196_2237
03430 Mismatch repair
CD196_2237
03440 Homologous recombination
CD196_2237
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cdc03032
]
CD196_2237
03400 DNA repair and recombination proteins [BR:
cdc03400
]
CD196_2237
Enzymes [BR:
cdc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CD196_2237
DNA replication proteins [BR:
cdc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CD196_2237
DNA repair and recombination proteins [BR:
cdc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CD196_2237
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DNA_pol_A_exo1
RNase_H_2
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
CBA64288
UniProt:
A0A0H3NDE4
LinkDB
All DBs
Position
complement(2597711..2598217)
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AA seq
168 aa
AA seq
DB search
MKEYVVVDLETTGLDPYKGCEIIEIGITEIKNEQIVKNYSRLIKPKGIISSFITELTHIS
NEMVENEEPLELVLPRFRKYIGDRTIIAHNAKFDLKFLNYYLRMLDLEPINNYICTVELL
KKCKSYKGKNKKLETACAYYNIENINAHRADSDTLATAKLFLKIKDEY
NT seq
507 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaatatgtagttgtggatttagaaactacaggattagatccatataaaggttgt
gaaataatagaaataggaataacagaaataaaaaatgaacaaattgtaaaaaactattca
aggttgataaaacctaaggggataatttcttcatttataacagaattgacacatataagt
aatgaaatggtagaaaatgaagaaccactagaattagttttacctagatttagaaaatac
ataggtgatagaactataattgcacacaatgcgaaatttgatttaaaatttttaaattac
tatcttaggatgttagatttagaaccaataaacaattatatatgtacagtagaattatta
aaaaaatgtaaaagttataaaggaaaaaacaagaaacttgaaacagcttgtgcttattac
aacatagagaatataaatgctcatagagctgacagtgatacattagcaactgcaaaacta
tttttgaaaataaaagatgaatattaa
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