Clostridioides difficile CD196: CD196_2340
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Entry
CD196_2340 CDS
T00997
Symbol
fdhA
Name
(GenBank) L-seryl-tRNA(Sec) selenium transferase (selenocysteinyl-tRNA(Sec) synthase)
KO
K01042
L-seryl-tRNA(Ser) seleniumtransferase [EC:
2.9.1.1
]
Organism
cdc
Clostridioides difficile CD196
Pathway
cdc00450
Selenocompound metabolism
cdc00970
Aminoacyl-tRNA biosynthesis
cdc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cdc00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
CD196_2340 (fdhA)
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CD196_2340 (fdhA)
Enzymes [BR:
cdc01000
]
2. Transferases
2.9 Transferring selenium-containing groups
2.9.1 Selenotransferases
2.9.1.1 L-seryl-tRNASec selenium transferase
CD196_2340 (fdhA)
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Gene cluster
GFIT
Motif
Pfam:
SelA
Se-cys_synth_N
Beta_elim_lyase
Cys_Met_Meta_PP
Aminotran_5
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
CBA64485
UniProt:
A0A0H3N985
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Position
complement(2714137..2715549)
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AA seq
470 aa
AA seq
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MIVLSKRELFAMLPSVDEVLSDNRIVEIINEYPRSLVLESVREVIDLKRQFILRLKEDAS
NSVTIEFGEIIESAIERVKLNYSLSLKKVINATGTVIHTNLGRSLLSEDIKDELWCAASR
YSNLEYDLDNGERGSRYSHLTSTIKRLTGAEDVLVVNNNAAAVLLVLSTMAKGGEAIVSR
GELVEVGGSFRIPSIMALSGAELVEVGSTNKTHLKDYKEAITEDTNVLMKVHTSNYRIMG
FTESVSIEELVNLGKKYKLPVIEDLGSGVFIDLSKYGLSYEPTVLDSIRQGADVVTFSGD
KMLGGPQAGIIVGKKEYIEKMKKNQLTRALRVDKLTICALEATLRMYLDETKAIENIPTL
KMLTYKIEELEVKANKLFEKITALNLNANINIEDGFSQVGGGSMPLETISTKVISITPEH
MNVSSLEKKLRLSEAHIIARVYDNKYVLDVRTIFDDEFDVIVAELRKAFN
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
gtgattgttttgagcaaaagagaattgtttgcaatgttgccttcagttgatgaagtatta
agtgataatagaattgtagaaataataaatgaatatcctagaagtttagttttagaatct
gtgagagaagtaatagatttaaaaagacaatttatattaagattaaaagaagatgcatca
aactctgtaacaatagagtttggtgaaataatagaatctgcaatagagagagttaagtta
aattactcattatctttaaaaaaagttataaatgcaactggtacagttattcatacaaat
ttagggaggtctttacttagtgaagatataaaagatgaattatggtgtgctgcttcaagg
tattcaaacttagaatacgatttggataatggagaaagaggttcaagatactctcattta
actagtacaataaaaagacttactggagcagaagatgtactagttgtaaataataatgca
gcggcagtacttcttgtacttagcacaatggctaaaggaggagaagcaattgtatctcgt
ggagaattagttgaagtaggtggttcatttaggattccaagtataatggctcttagtggt
gcagaattagttgaagttggttcaactaataaaactcatttgaaagattacaaggaggcc
attacagaagatacaaatgtattgatgaaggttcatacaagtaattatagaataatggga
ttcacagagagtgtttctatagaagaattggttaatttaggtaaaaaatataaactacct
gtaatagaagacttaggaagtggagtttttatagatttatcaaaatacggtttatcttat
gaaccaactgtattggattctattcgacaaggtgcagatgtagtaacttttagtggagat
aagatgcttggaggtccacaagcaggtattatagttgggaaaaaagagtatatagaaaaa
atgaagaaaaatcaacttactagagcacttagagttgataagcttacaatatgtgctctt
gaagcaacattgagaatgtatttagatgagacaaaagctatagaaaatatacctacttta
aaaatgttgacatataaaattgaagaattagaagtaaaagcaaataaactatttgaaaaa
ataactgctttaaacttaaatgcaaacataaatatagaagatggattttcacaagtggga
ggagggtctatgcctcttgaaactataagtacaaaggtaatatcaataactcctgaacat
atgaatgtttcatctttagaaaaaaaactaagacttagtgaagcacatataatagccaga
gtgtatgataataaatatgtactagatgtaagaactatatttgatgatgaatttgatgta
atagttgcggaattgagaaaagcatttaattaa
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