Clostridioides difficile CD196: CD196_2379
Help
Entry
CD196_2379 CDS
T00997
Symbol
elaC
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
cdc
Clostridioides difficile CD196
Brite
KEGG Orthology (KO) [BR:
cdc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cdc03016
]
CD196_2379 (elaC)
Enzymes [BR:
cdc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
CD196_2379 (elaC)
Transfer RNA biogenesis [BR:
cdc03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
CD196_2379 (elaC)
Prokaryotic type
CD196_2379 (elaC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Anti-Pycsar_Apyc1
Lactamase_B_3
Lactamase_B_4
Motif
Other DBs
NCBI-ProteinID:
CBA64561
UniProt:
A0A0H3N4F4
LinkDB
All DBs
Position
2762690..2763607
Genome browser
AA seq
305 aa
AA seq
DB search
MIDLTLLGCGGNVPMPNRFLSSVFINYKGRKILIDCGEGTQVSMKLKKCGFKDIDLICIT
HLHGDHIFGLLGLLSTIGNSGRTSDLTIVGPVGIVDCIRSMRNLVEYVPYTLKIIENPQG
NFSLDNKVLRNLEISTISLEHSIECLGYSFNFRRNPKFDIDKATKNEVPKILWNKLQEGQ
NIVLNSKQYTPDMVLGELRKGVKISLTTDTRPIESIPDFIKDSDLFICEAMYGDDLDISK
AVRNKHMTFREAANLAKLGNVKQLLLTHFSPSLDIPSMYLENATNVFENTILGEDRLSLR
LNFDE
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgatagatttaactttacttggatgtggtggaaatgtacctatgccaaacagatttcta
tcctctgtatttataaactataaaggtagaaaaatactaattgactgtggtgaaggtact
caggtatctatgaagctaaaaaaatgtggctttaaagatatagacttgatttgtataacc
catttacatggtgaccatatatttggacttttaggacttttatcaacaattgggaatagt
ggtcgtacaagtgatttaactatagttggtccagttggaatagtcgattgtatacgttct
atgagaaatttagtagaatatgtaccatacactttaaaaattatagaaaaccctcaaggc
aatttttctttagataataaagttttaagaaatttagaaatttcaacaatcagtttagaa
cactctatagagtgtttaggatacagttttaattttagaagaaaccctaaatttgatata
gataaggcaactaaaaacgaagttcctaaaatattatggaacaaactccaagaaggtcaa
aatatagttttaaattcaaaacaatacactccagatatggtcttaggagaattgagaaag
ggagttaagataagtcttacaaccgatacaagacctatagaatcaataccagatttcata
aaagatagtgatttatttatatgtgaagccatgtatggtgatgatttagatatatcaaaa
gctgttagaaacaaacatatgacttttagagaagctgctaatcttgcaaaacttggaaat
gtcaaacaacttttactgacccattttagtccttctttagacatacctagtatgtattta
gaaaatgctactaatgtttttgaaaatactattcttggagaagatagattaagcttgcgt
ttaaattttgatgaataa
DBGET
integrated database retrieval system
