Clostridioides difficile CD196: CD196_2436
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Entry
CD196_2436 CDS
T00997
Name
(GenBank) putative pseudouridylate synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
cdc
Clostridioides difficile CD196
Brite
KEGG Orthology (KO) [BR:
cdc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cdc03009
]
CD196_2436
Enzymes [BR:
cdc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
CD196_2436
Ribosome biogenesis [BR:
cdc03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CD196_2436
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
HTH_3
Motif
Other DBs
NCBI-ProteinID:
CBA64669
UniProt:
A0A0H3N9K0
LinkDB
All DBs
Position
complement(2830649..2831560)
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AA seq
303 aa
AA seq
DB search
MDEVKEFLVLEEEEEVRLDIYLAEQLGDMSRSYIQKIIKDGKVKVNNKVEKAKYLVKEED
NIVIEIPEPKVLEVLPQDIPIDIVYEDDDVLIINKPQDMVVHPAPGNYENTLVNGILYHC
KDKLSSINGVIRPGIVHRIDKDTSGLLMIAKNNYAHNFLAEQLKEHTITREYEFICYGVV
KEDKITVDKPIGRNPKDRLKMAVVKDGKNAITHFEVVERFDKFTHMRARLETGRTHQIRV
HALSINHPLLGDFVYGPKETKFKLKGQTLHAKKLGFIHPTTKEYIEFNSELPEYFKEAIK
KIK
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagtaaaagagtttttagtacttgaagaggaagaagaagttagacttgatatt
tatctagcagaacaattaggtgatatgtcaagaagttatatacaaaaaattataaaagat
ggaaaagtaaaggtcaataataaagtagaaaaagctaaatatctagttaaagaggaagat
aatattgttatagagataccagaacctaaagtattagaggttttacctcaagatattcca
atagatattgtatatgaagatgatgatgtcttaataataaataaaccccaggatatggtt
gttcatcccgctcctggaaactatgaaaatacactagtaaatgggattttatatcattgt
aaagataagttgtcgtcaataaatggagttattagacctggtatagttcatagaatagac
aaagatacttctggtcttcttatgatagctaagaacaattatgcacataattttctagca
gaacagttaaaggaacatactataactagagagtatgaatttatatgctatggtgtggtt
aaagaagataaaataactgttgataaacctatagggagaaatcctaaggatagattaaaa
atggctgtagtaaaggatggaaaaaatgcaattactcattttgaagttgtagaaagattt
gataagtttacacatatgagagctaggcttgaaactggtagaactcatcaaataagagtt
catgctttgtctataaatcacccacttttaggtgattttgtatatggtccaaaagaaact
aaatttaaattaaaaggacaaactttgcacgctaagaagttgggatttatacatcctacc
actaaggaatatatcgaatttaattcagaattacctgagtattttaaggaagctattaag
aagataaaataa
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