Clostridioides difficile CD196: CD196_2552
Help
Entry
CD196_2552 CDS
T00997
Name
(GenBank) LysR-family transcriptional regulator
Organism
cdc
Clostridioides difficile CD196
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
Motif
Other DBs
NCBI-ProteinID:
CBA64893
UniProt:
A0A0H3N9W1
LinkDB
All DBs
Position
2969799..2970680
Genome browser
AA seq
293 aa
AA seq
DB search
MNLYHLRYFVTLAHLEHYTKAAENLSITQPSLSHAISLLENELGVALFEKEGRNIVLTKY
GKIFLKDVEKSLEILDSSVKSLKITGTGEGQIDLAFLRTLGTDFIPDIVHKFLKSNPAKS
IDFKFHTGVTTDIIQGLKERKYDIAFCSKLEKEKGIEFIPVAKQDLVLIVPYSHPLAAKD
TIDLKETIPYPQIVFNQRSGLRYIIDDMFKKINQQPNIVYEVEEDQVIAGLVAKNFGIAV
VPNMNMLSFTKVKVIQIIHPSWERNFYLAFIKDRYLPPAIKNFKNFVIKNAQL
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
ttgaatttatatcacttacgctattttgttacattggcacatttagaacactatacaaaa
gcggcagaaaatttatctataacacaaccaagcttaagtcatgctatttctttactagaa
aatgaacttggggtggctctatttgaaaaagaaggtagaaatatagtccttactaagtat
ggaaaaatatttttaaaagatgtggaaaaatcattagaaattttagattcaagtgtaaaa
tcattaaaaataactggtactggtgaaggacaaatagacttagcttttcttagaacactt
ggtactgattttatcccagacatagtgcataaatttttaaaatctaatcctgctaaatca
atagattttaaatttcatactggtgtaactactgacattattcaaggtcttaaagaaaga
aaatatgatattgcattttgttcgaaacttgaaaaagaaaagggaattgaatttatacct
gttgccaaacaagatttagtactaattgtaccatatagtcatccactagctgcaaaggat
actatagatttaaaagaaaccataccttatcctcaaatagtatttaatcagagaagtggt
cttagatatataattgatgatatgtttaaaaaaataaatcaacagcctaatatagtctat
gaagtagaggaagaccaagtaattgctggattagttgcaaaaaatttcggaattgctgta
gtcccaaatatgaatatgcttagctttacaaaagtaaaagtaattcagattattcaccca
agttgggaaagaaacttttacttagcatttataaaagatagatatttgcctcctgcaatt
aaaaactttaaaaactttgtcattaaaaacgctcaattataa
DBGET
integrated database retrieval system
