Clostridioides difficile CD196: CD196_2554
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Entry
CD196_2554 CDS
T00997
Name
(GenBank) cell surface protein
Organism
cdc
Clostridioides difficile CD196
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GFIT
Motif
Pfam:
CW_binding_2
Choline_bind_3
Choline_bind_1
YkuD
Choline_bind_2
DUF3823
Phage_Orf51
Motif
Other DBs
NCBI-ProteinID:
CBA64897
UniProt:
A0A0H3NEC4
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Position
complement(2971906..2973867)
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AA seq
653 aa
AA seq
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MFLKEGEVIVKKSLKKYLVLALTLVLVFACGVPESSAASKHVIIVNSRKNTLGYFVNNKL
VKEFRVATGKKGSETPTGKTKVVNKIKNRPYYKGNIPGGSPRNPLGDRWMGLALKGTYGD
TYGIHGNNNESSIGKHISGGCIRMHNKDVRWLFDQVPVGSDVIIDYSNDSYVKIAAKYKI
NLNQTGWKTENGKKYYVKSDGTYQKNSWLKVNGKMYYFDASGVMQTGWKAINNKKYYLGT
DGARVSGWKVIDGKTYYFNSDGVMQTGWQEKNGKKYYLGSDGLSVTGWQEIDGNKYYFDK
TGIMQTGWQQIDGKSYYLDKDGKMLTGSQKIDGKDYTFNEDGTINPTWDTIIGANRFDTA
KKISSVGNWNADSSDTVILVNGNAIADGITATPLASSYDSTILLTNTANLPTETVEEMKL
LAPKTVILIGGENAISSKLEQEIKTTFNTETKRIAGQDRYQTATRIAEELGNREEIKTAY
MVSGNGEADALSVASKAGEEKQPIILVNKDGITEESYKWLTERKLENAYFIGGPSAINDS
VIAKMNDITTEDISGNRIYGDSRVDTNAKVIEKFYGDTDLQAVLVSKSDALVDALSAGPL
AVKLHSPIVLMDNSGLSLEQQRVFANKKVETPYQIGGGVSYIVMDKLMDILAK
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgtttctaaaagagggggaagttatagtgaaaaaaagtctaaaaaagtatttagtacta
gcactgactttagttttagtatttgcatgtggcgtaccagaatcaagcgcagccagtaaa
catgtgattatagtaaattcaagaaagaatactctaggatattttgtaaataataaactt
gtaaaagaatttagagttgcaacaggtaaaaaggggtcagaaacaccaacagggaaaaca
aaagtagttaacaagataaaaaatagaccatattataaaggtaatatacctggaggaagt
ccaagaaatccattaggagatagatggatgggattagcattaaaaggaacttatggagat
acatatggaatacatggaaataataatgagagttctataggaaagcatatttctggtgga
tgtataagaatgcacaataaagatgttagatggttatttgaccaagttcctgtaggttca
gatgtaattatagattatagtaatgacagctatgtaaagatagcggcaaaatataagata
aatctaaatcaaacaggatggaaaacagaaaatggtaagaagtattatgtaaaatctgat
ggaacataccaaaagaatagttggctaaaagtaaatggaaaaatgtattactttgatgct
tcaggagtaatgcaaacaggatggaaagcaattaataacaaaaaatattatttaggaact
gatggagcaagagtatctggatggaaagtaatagacggaaaaacttattactttaactca
gatggagtaatgcaaacaggatggcaagaaaagaatggaaagaaatactatctaggatct
gatggtttatcagtaacaggatggcaagaaatagatggtaataagtattactttgacaaa
acaggaataatgcagacaggatggcaacaaatagatggtaagtcttactatttagacaaa
gatggaaagatgctaactggttctcaaaaaatagatgggaaagattatacttttaatgaa
gatggaactataaatcctacatgggatacaattataggtgcaaatagatttgatacagct
aaaaagataagttcagttggaaactggaatgctgatagttcagatactgtaatattagta
aatggtaatgcaatagctgatggtataacagcaactcctttagcaagtagctatgactca
acaatactacttactaatacagctaatttaccaactgaaactgttgaagaaatgaagtta
ttagcacctaaaacagtaatcttgataggtggagaaaatgcaataagttctaaattagag
caagaaataaaaactactttcaacacagagacaaagagaatagcaggtcaagatagatat
caaactgctacaagaatagctgaagaacttggaaatcgagaagaaataaaaactgcatat
atggtttctggaaatggggaagcagatgctttatctgtagcttctaaagctggggaagaa
aaacaacctataatattagtcaataaagatggaattacagaagaatcttataaatggcta
acagaaagaaaattagaaaatgcatactttataggtggaccaagtgcaattaacgattca
gtaatagcaaaaatgaatgatataactactgaagatatttcaggaaatagaatatatgga
gatagtagagtagatactaatgccaaagtaatagaaaaattctatggagatactgattta
caggctgtattagttagtaaatcagatgctttagtagatgctttatcagctggaccatta
gctgtaaaattacattcaccaatagttttaatggataattcaggattatcattagagcaa
caaagagtatttgcaaataaaaaagttgaaactccttatcaaataggaggcggagtatct
tatatagtaatggataaattaatggatattcttgcaaaatag
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