Clostridioides difficile CD196: CD196_2568
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Entry
CD196_2568 CDS
T00997
Symbol
glyA
Name
(GenBank) putative serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
cdc
Clostridioides difficile CD196
Pathway
cdc00260
Glycine, serine and threonine metabolism
cdc00460
Cyanoamino acid metabolism
cdc00630
Glyoxylate and dicarboxylate metabolism
cdc00670
One carbon pool by folate
cdc00680
Methane metabolism
cdc01100
Metabolic pathways
cdc01110
Biosynthesis of secondary metabolites
cdc01120
Microbial metabolism in diverse environments
cdc01200
Carbon metabolism
cdc01230
Biosynthesis of amino acids
cdc01240
Biosynthesis of cofactors
cdc04981
Folate transport and metabolism
Module
cdc_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
cdc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
CD196_2568 (glyA)
09102 Energy metabolism
00680 Methane metabolism
CD196_2568 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
CD196_2568 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
CD196_2568 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
CD196_2568 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
CD196_2568 (glyA)
Enzymes [BR:
cdc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
CD196_2568 (glyA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
CBA64925
UniProt:
A0A0H3N4Z7
LinkDB
All DBs
Position
complement(2995954..2997198)
Genome browser
AA seq
414 aa
AA seq
DB search
MFENLKKADPEIYESMKRELKRQQRNIELIASENIVSVPVMETMGSHLTNKYAEGYSGKR
YYGGCEYIDEVETLAIDRIKKIFGAEHANVQPHSGANANIGVYFAMLKPGDVVMGMNLSQ
GGHLTHGAPVNISGQYYKFYEYGIDKDSGLIDFDEVRKIAHEVKPKMIVAGASAYPREID
FKKFREIADEVGALLMVDMAHIAGLVAAGIHQNPCEVADFVTTTTHKTLRGPRGGVILCK
EKYAKDIDKAIFPGIQGGPLEHIIASKAVCFKEALSDEFKEYQVQVAKNAKALAEELIKR
DFKLISGGTDNHLILLDLINKNITGKAAEKRLDDAYITANKNTIPFDPNGALVTSGIRLG
TPAVTTRGMKEEDMAIIAEAIDLCLTYDEESKARTLVVGLTEKYPLYEEYNIMD
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgtttgagaacttgaaaaaagcggatcctgagatttatgaaagtatgaaaagagagtta
aaaagacaacaaagaaatattgaattaatagcatctgaaaacatagtatcagttccagta
atggaaactatgggaagtcatcttacaaataagtatgcagaaggttactcaggcaaaaga
tattatggtggatgtgaatacatagatgaagttgaaactcttgcaatagatagaatcaaa
aaaatatttggagcagaacatgctaatgttcaacctcactctggagcaaatgcaaatatt
ggtgtatattttgctatgttaaaaccaggtgatgttgttatgggaatgaatttatctcaa
ggtggacatttaactcatggtgctccagttaatatttctggtcaatattataaattttat
gaatatggtatagataaagacagtggacttatagattttgatgaagttagaaagatagca
catgaagtaaaacctaaaatgatagttgcaggagcaagtgcatatcctagagaaatagat
tttaaaaagtttagagagatagctgatgaggttggagcattgcttatggtagatatggct
catatagcaggtcttgtggctgctggtattcaccaaaatccatgtgaagtggctgatttt
gttacaacaacaactcacaaaactttaagaggacctcgtgggggtgttattctttgtaaa
gaaaaatatgctaaagacatagacaaagcaatattccctggtattcaaggtggacctctt
gaacatataattgcttctaaggcagtttgctttaaagaagctttaagtgatgagtttaaa
gaatatcaggtacaagttgctaaaaatgcaaaagccttagctgaagaacttattaaaaga
gattttaaattgatttctggaggtacagataatcatttaatactattagatttgattaat
aaaaatataactggtaaagcagcagaaaagagattggatgatgcttatataacagctaat
aaaaatacaattccatttgatccaaatggtgctcttgttacaagtggaataagacttggt
actccagctgtaactactagaggtatgaaagaagaagatatggcaataatcgctgaggct
atagacctatgtttaacttatgatgaagaatctaaggctagaacattggttgttggttta
actgaaaaatatcctttatatgaagaatataatattatggattaa
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