Clostridioides difficile CD196: CD196_2675
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Entry
CD196_2675 CDS
T00997
Name
(GenBank) putative collagen-binding protein
Organism
cdc
Clostridioides difficile CD196
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Gene cluster
GFIT
Motif
Pfam:
SpaA
Collagen_bind
Big_8
EURL
Gram_pos_anchor
Motif
Other DBs
NCBI-ProteinID:
CBA65127
UniProt:
A0A0H3N6G3
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All DBs
Position
complement(3136844..3139798)
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AA seq
984 aa
AA seq
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MKKGNKKALLISLIMILSMVVSTIYPTVSYASELGENSQIQSGSTNSSTGEEKESDNKKP
EQTPEKDKATDNKKPEQTPEEDNSTDNKKPEQTSEEDKSTDNKKPEQTPEGEKPIDNKKP
EQTPEGEKSIDNKKPEQIPEEDKSTDNKKSEQALEDEKPLDNKNTEKTPEEDNLLEDENL
LKVLEEELNEDYGFVVKINNNTIETESMKKISFNLTYTPTSKGIQAGDSITFKVPDVFNK
VNLDYTSECFDKTESNGEYTLTFRELPNGQSVMQGKIGLEAYVKKVDEDTNAKIHIETTG
KIESGSGDIDVEIKPGDKTDVPDAKGTLKKLVEGRKSTTVFMPVKNKDINYSIQVNEKQE
ELKDIILYDELPEGLTLINGSVSVVTSDGKEVSDFNIEQSKNSISVNFGNIDKSYTVKYK
ARISDKNAKHGNKYKNVARIESDGKKIQEDDATVSIFDRGDNYLLTKGHSGATNITQVGQ
VINYQISINDDKSPISNVVITDNIPEGMRLTTSGEDGHDFRVVEVPMNGSWTPWSKEKIA
NNISYKVEEKRNESGQVDKVITGFTINLSKEEVESKFFIAYTLKVISIEDSYINRAVLDA
NNSEIDKNDEINFKKNSGLISAKKEVDKKVLNSSDNQIVKYKINMSTYGVYDAGQVNLLD
EVNPSLKISNIKYSDNLELKKEAGDGKNTIRLVNKYEFKQIKEGEPVQSWVTFDADFTNV
KVGETIQNVAQINGSSPPGVETTKQGYAFEAKKVDALDKNVLSGAKFNLEDAFGNIVVKD
LVSDEDGVIQSSVKKPGIYYLVEVMAPSGYEKLKDKIKVEIGNKDIGRIVDIGNIENIRQ
ENPPVNPPVPPNTDEPIVNPPVPPSTDKPRKPSNPSDTEDTIVINPPVPPSEDIINPPIP
EILNPPVPPSEEVIETPVKQIVPIPEVVKPSVSEEKNNKAKDDTLVNPPVPPKTGDSTTI
IGEILLVIGAIVGLVVLRRNKNTN
NT seq
2955 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaggaaataaaaaggcattattaattagtttaattatgattttaagtatggtg
gtgtctacaatatatccaactgtatcttatgcttcagaattaggagagaatagtcagatt
caaagtggttcaactaattcatcaactggagaggagaaggaaagcgacaataaaaaacca
gaacagactccagagaaagataaggcaacagataataaaaaaccagaacagaccccagag
gaagataattcaacagataataaaaaaccagaacagacttcagaagaagataagtcaaca
gataataaaaagccagagcaaactccagaaggagaaaagccaatagataataaaaagcca
gagcaaactccagaaggagaaaagtcaatagataataaaaagccagagcaaataccagaa
gaagataagtcaacagataataaaaagtcagaacaagctttagaagatgaaaaaccacta
gacaataaaaatacagaaaaaactccagaggaagataatctattagaagatgaaaattta
ttgaaagttttagaagaagaacttaatgaagactatggatttgttgtaaaaattaataac
aatacaatagaaacggaatcaatgaaaaaaatatcatttaatttaacttatactccaaca
tcaaaaggaatacaagcaggagattcaataacttttaaggtgccagatgtattcaataaa
gttaatttagattatacaagtgaatgctttgataaaacagaaagtaatggagagtataca
cttacatttagagaattacctaatggccaaagtgtaatgcaaggtaaaataggtttggaa
gcatatgttaaaaaggttgatgaagatactaatgcaaaaatacatattgaaaccactgga
aaaatagaaagtggaagtggagatatagatgtagaaataaaacctggagataaaacggat
gttccagatgctaaaggaacacttaaaaagcttgttgaaggaagaaaatcaactactgta
tttatgccagttaaaaataaagatataaattacagtatacaagtaaatgaaaagcaggaa
gagttaaaagatattattttgtatgatgagcttcctgaaggattgacattgataaatggt
tctgtaagtgtagtaacaagtgatggaaaagaagttagtgattttaatattgaacagagt
aaaaattctatttcagttaattttggaaatatagataaatcgtatactgttaagtataag
gctagaatcagtgacaaaaatgcaaaacatggtaataaatataagaatgtagctaggatt
gaatctgatggtaagaagatacaagaagatgatgctactgtaagtatatttgatagagga
gataattatcttcttactaaaggacattcaggagcaacaaatattactcaagttggtcaa
gtaataaactatcagatttcaataaatgatgataaatcaccaataagtaatgttgttata
acagataatataccagaaggtatgagattgactacttcaggagaggatgggcatgatttt
agagttgtagaagttccaatgaatgggagctggactccttggagtaaagaaaaaattgcc
aataatatttcatataaagtagaagaaaaaagaaatgaaagtgggcaagtagataaagtt
ataactggatttacaattaatctcagtaaagaagaagtagaatcaaagttttttatagct
tatacattaaaggtaattagtattgaagatagttatataaatagagctgtccttgatgca
aataatagtgaaattgataaaaatgatgagataaactttaagaaaaattctggattaata
agcgcaaaaaaagaagttgataaaaaggttttaaatagtagtgataaccagattgttaaa
tacaaaatcaatatgtcaacttatggggtttatgatgcaggacaagtaaatcttttggat
gaagtaaacccatctctaaaaatatctaatataaaatattctgataatcttgaacttaaa
aaagaagctggagatggaaaaaatacaataagattagtaaataaatacgaatttaaacag
ataaaagaaggggaacctgtgcaaagctgggttacatttgatgcagacttcacaaatgta
aaagttggggagactatacaaaatgtggctcagattaatggttcaagtcctccgggagta
gagactactaagcaaggttatgcttttgaagctaaaaaagtggatgctttagataaaaat
gtactttcaggtgctaagttcaatttagaagatgcatttggaaatatagtagttaaggat
ttagttagtgatgaagatggtgtaattcaatctagtgtaaaaaaaccaggaatatattat
ttagtagaagtgatggctccaagtggatatgaaaaactgaaggataaaattaaggttgaa
attggtaataaagatattggtagaatagtagatatcggaaatatagaaaacataagacaa
gaaaatccaccagtaaatccacctgtaccgccaaatacagatgaaccaatagtaaatcca
ccagtgccaccaagcacagataaaccaaggaaaccatcaaatccatctgatacagaggat
actatagttataaatccaccagtaccaccgtcagaagatataataaatcctccaatacca
gagatattgaatccaccagtaccaccatcagaagaggtgatagaaactcctgttaaacag
attgttccaataccagaagtggtaaagccatcagtgtcagaagaaaaaaataataaagct
aaagatgatactttggtaaatccaccagtaccaccaaaaacaggggatagtactacaatt
attggagaaatacttttagttataggagctattgtaggacttgtcgtattaagaagaaat
aaaaatacaaattag
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