Clostridioides difficile CD196: CD196_2678
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Entry
CD196_2678 CDS
T00997
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
cdc
Clostridioides difficile CD196
Pathway
cdc00260
Glycine, serine and threonine metabolism
cdc00460
Cyanoamino acid metabolism
cdc00630
Glyoxylate and dicarboxylate metabolism
cdc00670
One carbon pool by folate
cdc00680
Methane metabolism
cdc01100
Metabolic pathways
cdc01110
Biosynthesis of secondary metabolites
cdc01120
Microbial metabolism in diverse environments
cdc01200
Carbon metabolism
cdc01230
Biosynthesis of amino acids
cdc01240
Biosynthesis of cofactors
cdc04981
Folate transport and metabolism
Module
cdc_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
cdc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
CD196_2678 (glyA)
09102 Energy metabolism
00680 Methane metabolism
CD196_2678 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
CD196_2678 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
CD196_2678 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
CD196_2678 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
CD196_2678 (glyA)
Enzymes [BR:
cdc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
CD196_2678 (glyA)
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Cys_Met_Meta_PP
Aminotran_5
DegT_DnrJ_EryC1
DUF6445
Motif
Other DBs
NCBI-ProteinID:
CBA65134
UniProt:
A0A0H3N591
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All DBs
Position
complement(3144868..3146124)
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AA seq
418 aa
AA seq
DB search
MLKTTKISDPELYKIVADELVRQEHNIEMIASESTAPTEVLELSGCVFTNKTEEGYPGAR
FQAGSEEADKLETLAIKRAKEVFGAEHVNVQPYSGSTANYCVYSSILKPNDTVLSMRLDQ
GGHLTHGSAVNFLHDIYKYEFYGVDPNTGRIDYDALEAKAKECRPKLIIAGASSYPRLID
YERISKVAKEVGAYFMVDMAHVAGLVAAKVIPSPVPYADFVSSSTTKTFCGPRSGIVLCK
AEHAKKLDKGVFPGTLGSIHLNTVAAKAFSLLYLSTDKFKKIMEQVVVNAQTLASELISH
GFSIVSGGTDNHIVMVDLRSKNLTGKQFEKALEYVGITVNKNVIPDDPQSPFVTSGVRIG
LTSISQRGLKEKEVIQIAGIMNKVAENIDNKEVLDECKAEAQELISKFPLYPEGYFED
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaaacaacaaaaatttcagacccagagttatacaagattgtagctgatgagttg
gttagacaagaacacaatattgagatgatagcttctgaaagtacagcaccaacagaagta
cttgaattaagtggatgtgtatttacaaataaaacagaagaaggctatccaggggctcgt
tttcaagcaggttctgaagaagcagataaacttgaaaccctagcaataaaacgtgcaaaa
gaagtatttggagcagaacatgtaaacgtacaaccgtattcaggttctacagctaactat
tgtgtatattcatcaatattaaaaccaaatgacactgttttaagtatgcgtcttgaccaa
ggtggacacttgacacatggtagcgcagttaattttttacatgacatttataaatatgaa
ttttatggggtagacccaaatactggacgtatagattatgatgctcttgaagcaaaggca
aaagaatgtagaccaaaacttataattgcaggggcaagttcatatccaagattaatagat
tatgaaagaatatcaaaggttgcaaaagaagtaggagcttactttatggtagatatggca
catgttgcaggattagtcgcagcgaaagtaatacctagtcctgtaccttatgcagatttt
gtttcttcatctacgacaaagactttctgtggaccaagaagtggtattgtactttgtaaa
gcagaacatgcaaagaaactcgataaaggtgtttttccaggaacattagggtctatacat
cttaatacagttgcagcaaaagccttttcactattatatttaagtacagataaatttaaa
aagataatggagcaagttgtagtaaatgctcagactctagcttctgaactgatttcacat
ggttttagtattgtaagtggaggtactgataatcatatagtaatggttgacttaagaagt
aagaatcttacaggaaaacaatttgaaaaagctcttgaatatgtaggaataacagttaat
aaaaatgttatacctgacgacccacaatcaccatttgtaactagtggtgttcgtataggt
cttacatcaatatctcaaagaggtctgaaagaaaaagaagttatacagatagcaggaata
atgaataaggtagcagaaaatattgataataaagaagtattagatgaatgtaaagcagag
gcacaagaacttatatctaagttcccattatatccagaagggtattttgaagattaa
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