KEGG   Clostridioides difficile CD196: CD196_2766
Entry
CD196_2766        CDS       T00997                                 
Name
(GenBank) conserved hypothetical protein
  KO
K07012  CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
Organism
cdc  Clostridioides difficile CD196
Brite
KEGG Orthology (KO) [BR:cdc00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:cdc02048]
    CD196_2766
Enzymes [BR:cdc01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     CD196_2766
Prokaryotic defense system [BR:cdc02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Type I signiture cas proteins
    CD196_2766
SSDB
Motif
Pfam: Cas3-like_C_2 DEAD Helicase_C Cas3_HD ResIII AAA_19
Other DBs
NCBI-ProteinID: CBA65389
UniProt: A0A0H3N5E5
LinkDB
Position
complement(3248044..3250365)
AA seq 773 aa
MLYAKSNPVETLREHTDELLKQMNVLRESYGKNINSLDFLEEEIFWQLLDFVIEFHDIGK
AFSPFQELIKSRMDTKINEPKIVTHLENNVGHNYLSPAFIDYSYIDRKKNKELRAVLNQV
IVYHHERDIFIDKDFKNLIQKILDEDLINKVYELQREFKVRYPIKTEKLSKVYLQSVEKR
IDKNHKYYNLYIMLKGILHRLDHSASAHEVVECNNVINIGEQTENYLMKEFGSLREAQSF
AKSNRNKNIILIASTGMGKTETALIWIDKDKAFFTLPLRVSINALFDRAKNIIGVGEAND
TFLGLLHSTAIDYLEESNQENSSEIVDLAKLLSCKLTFSTIDQIFKFPFLYRGYEKVYST
LAYSKVVIDEIQAYSPEIAAVLVKGIEMIHKIGGRFMIMTATMPTIYIDELKKRGVMNSN
LADLTCNTEKIRHCVSIVENSIDENLGKIIQSGMNKKVLVIVNTVKSAVEKYELIEEIVK
PKGIDVNLNLLHSMYIQEDRAKLEKYIKEFADSDSNGIWITTQLVEASLDIDFDELHTEN
STLDSLFQRFGRCYRSREYEENSPNIFIYTEKATGIGSIYDKDIVEKGLELLKTFINGKE
CVKMKEKYKVEMVKILYSKESLEGTAFEKRFTSALNILDTITPYSLGSKDAQNILRNIEG
YTVIPEDIYNKIEETLIKDYEELGQELINAYSNDDRQLINKIKSKRKKARREIIKKTVNL
PIYKAKQNVIDIQVKGLEDLKILLYKYDIHENKHTKQIFGKGVLISNEIDQFI
NT seq 2322 nt   +upstreamnt  +downstreamnt
atgttatatgctaaatctaatccagtggaaacacttagagaacatactgatgaactttta
aaacaaatgaatgtattaagagaaagttatggaaaaaatataaatagcttagattttcta
gaggaagagatattttggcaattacttgactttgttatagaatttcatgatattggaaaa
gcattttcaccgtttcaagagttaataaaaagcagaatggatactaaaataaatgaacct
aaaatagtaactcatttagaaaataatgtaggccataattatctttctcctgcatttatt
gattatagttatatagacaggaaaaaaaataaagaacttagagcagtattaaatcaagtt
attgtatatcatcatgaaagagatatctttatagataaagattttaaaaatttaatacaa
aaaatattagatgaagatttaataaataaagtttatgaactacagcgtgaatttaaagtt
agatatccaataaaaacagaaaaattgagtaaagtatatctacaaagtgtagaaaaaaga
atagataaaaatcacaagtactataatttatatattatgttaaaaggaatactacataga
ctagaccatagtgcttctgctcatgaagttgtggaatgcaataatgttataaatatagga
gaacagacagaaaattatttaatgaaagagtttggtagtttgagagaggctcaatcattt
gctaaatctaatagaaataagaatataatactgattgcatctacaggaatgggaaaaaca
gaaactgctttgatttggatagataaggataaagcattttttacactaccattaagagta
agtataaatgcattatttgatagggctaaaaatataattggagtaggagaagcaaatgat
acattcttaggtctgttacattcaacagcaatagattatttagaagaaagtaatcaggaa
aattcaagtgagattgtagatttagcaaagttattatcttgtaaactgacattttccaca
atagaccaaatatttaaatttccttttttgtatagaggctatgaaaaagtgtactcaaca
ttagcatattcaaaagtagtaatagatgagatacaagcatattcaccagaaatagcagct
gtattggtaaaaggtatagaaatgatacataagataggtggcagatttatgataatgaca
gctactatgccaaccatatatatagatgaattaaaaaaaagaggtgtaatgaatagtaac
ttagctgacttgacatgtaacacagaaaaaataagacattgtgtgtctattgtagaaaat
tcaatagatgaaaacttaggtaaaataatacaaagtggaatgaataaaaaagttcttgta
atagtaaatacagttaaaagtgctgtagaaaaatatgagttaatagaagaaatagttaaa
ccaaaaggaatagatgtcaacttaaatcttttacattctatgtatatacaagaagataga
gcaaaattagaaaaatatataaaagaatttgcagatagtgatagtaatggtatttggatt
actacacaattagtggaagcatcccttgatattgattttgatgagcttcatacagaaaat
tcaacacttgacagtctatttcaacgatttggtagatgttatagaagtcgtgagtatgaa
gaaaatagcccaaatatatttatatatacagaaaaagctacaggaataggtagtatttat
gataaggatattgtagaaaaaggacttgagctactgaaaacttttataaatggaaaagaa
tgtgtgaagatgaaagaaaaatataaggtagaaatggttaagatactatactctaaagaa
agtctagaaggtacagcttttgaaaagagatttaccagtgctttaaatattttagatact
ataacgccatatagtttaggttctaaagatgcacaaaatatacttagaaatattgaagga
tatacagtaattccagaggatatatataataaaattgaagaaactttaatcaaagattat
gaagagttgggacaagagcttataaatgcatatagtaatgatgatagacaattgataaat
aaaataaagtctaagagaaaaaaagcaagaagagagataattaaaaaaactgtaaattta
ccaatatataaagctaaacaaaatgtaattgacatacaggtgaaaggtcttgaagattta
aaaatacttttatataaatatgatatacacgaaaataagcatacaaaacagatatttggt
aaaggtgtgcttataagtaatgaaatagaccaatttatttga

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