Clostridioides difficile CD196: CD196_2875
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Entry
CD196_2875 CDS
T00997
Name
(GenBank) transcription antiterminator
KO
K03491
probable licABCH operon transcriptional regulator
Organism
cdc
Clostridioides difficile CD196
Brite
KEGG Orthology (KO) [BR:
cdc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cdc03000
]
CD196_2875
Transcription factors [BR:
cdc03000
]
Prokaryotic type
Other transcription factors
BglG family
CD196_2875
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PTS_EIIA_2
PRD
HTH_11
Mga
HTH_Mga
Motif
Other DBs
NCBI-ProteinID:
CBA65704
UniProt:
A0A0H3N5V4
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All DBs
Position
3380543..3382537
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AA seq
664 aa
AA seq
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MYIIIRTFNYINIISYRFYFKTMRGNLMKTSKKELFLNFIKTQHDWIDSSTLANYLNVST
RSIRKYVNEINSTGEFILSSKKGYKVNLNNNCQTKVDSSENISPDNRLNLILKELIVNSN
GINIFDLSEELFVSPATIEGDIVKANKFIGSYNLKIKQSKFLLKLIGNESAKRKLMSSII
FKETGSDFLSLFDVQKIYQEYNLTKLKENIIYILKKYNLFINEYAINNILLHLMITIDRI
KKNNYIESVEVVNYIDNNNDISISRDISNFLESEYNLTLTSAELYYLVFQLTNKTTVLNY
HEMDTKSLPNYIDEHFVKLTKKIIKNVYDLYFIDLSDDEFVVKFTLHVKNLISRAKNNQV
LRNQIPQKLKDSYPLIYDISVYICNQIQILENIEIDEDEISYISLHVGSFFDRQKLLEDK
ILCALITPNYYDLQFKIVRDLEKRFNESIEIIQIFSDTHNLDFDNKVDMVITTLPISDRC
PIPFVYVNPYLNRKDYDNIQSKFIQIKDRKNILTVQNHLEMYFSESLFMKNIYLDSAKDY
IKFMGNILYKNKYVKPNYIDDVLIREKMSSTAFNNNVAIPHSMKMDALKTGVCLIVNDKP
VKWGEEKVQIIAMIPINEKEKEKFNYIFESFIEILSEWNNVKELTKADNYSSFMNRIAYL
IQNI
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgtacattataatacgtacattcaattatataaatatcatatcatacagattttatttt
aaaactatgagagggaatctaatgaaaacatctaaaaaagagttatttttaaacttcata
aaaacgcaacatgattggatagattcatccacattagctaattatcttaatgtatcaaca
cgttcgattagaaaatatgtaaatgaaattaattctactggtgaatttatattatcctct
aaaaaaggatataaagtaaatctcaataataactgtcaaaccaaggttgatagttcagaa
aatatatcacctgataacaggttaaatttaattttaaaagaacttatagttaatagtaat
ggaattaatatatttgatttaagtgaagaattgtttgttagtccagctactattgaaggg
gatatagtcaaagctaataaatttataggaagttataatttaaagataaagcaatcgaaa
tttttattgaaactaattggaaatgagtctgcaaagcgcaaattaatgagctctataata
tttaaagaaacgggaagtgattttttaagcttatttgatgtacaaaaaatatatcaagag
tataatttgaccaaactgaaagaaaatataatatatatattaaaaaaatacaatttgttt
ataaatgagtacgctataaataacatacttcttcatttaatgataactatagacagaata
aaaaagaataactacatagaatctgtcgaagtagtaaactacatagataataataatgat
ataagcatttcaagagatatatcaaattttttagagtctgaatacaatttaactttaact
agtgcagaattatactacttagtatttcagttaacaaacaaaaccacagtcttaaattat
catgaaatggatactaagtcattgccaaattatatagatgaacattttgttaaattaact
aaaaaaataattaaaaatgtatatgacttatactttatagatttatctgatgatgaattt
gttgtaaaatttactcttcatgtaaaaaatttaatcagtagggctaaaaataatcaagtt
ttgagaaatcaaatacctcagaagttaaaagattcctaccctctgatatatgatatatct
gtttatatttgtaatcaaattcaaattttagaaaacatagaaatagatgaagatgaaata
tcgtatatatctcttcatgtaggttcattttttgatagacaaaaattactagaagataaa
attctctgtgcattaattactccaaattactatgatttacaattcaaaatagtaagagac
ctcgagaagagatttaatgaatccatagaaattattcaaattttttcagatactcataat
cttgattttgacaataaggtagacatggttattactactttaccaattagtgatagatgc
cctataccttttgtttatgtaaatccttacctaaacagaaaagattatgataatatccaa
agtaaatttattcagattaaagatagaaaaaatatacttactgtacaaaatcatttagaa
atgtactttagtgaatctttgtttatgaaaaacatatatttagatagtgctaaagattac
ataaaatttatgggaaatattctgtacaaaaataaatatgtcaaacccaattatatagat
gatgttcttataagagaaaaaatgtcttcaactgcatttaataacaatgtagcaattcct
catagcatgaaaatggatgctttaaaaactggagtatgtttaattgttaacgataaacca
gttaaatggggtgaggaaaaagttcaaattatagctatgatacctataaatgaaaaagaa
aaagaaaaattcaattacatatttgaaagctttattgaaatattatctgagtggaataat
gttaaagaacttactaaggcagataactacagtagttttatgaatagaatagcttatctt
attcaaaatatctaa
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