Clostridioides difficile CD196: CD196_2912
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Entry
CD196_2912 CDS
T00997
Symbol
tndX
Name
(GenBank) conjugative transposon site-specific recombinase
KO
K06400
site-specific DNA recombinase
Organism
cdc
Clostridioides difficile CD196
Brite
KEGG Orthology (KO) [BR:
cdc00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99978 Cell growth
CD196_2912 (tndX)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Recombinase
Resolvase
DUF4368
Zn_ribbon_recom
ANC1_spectrin
Motif
Other DBs
NCBI-ProteinID:
CBA65815
UniProt:
A0A0H3NFE5
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Position
complement(3435586..3437199)
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AA seq
537 aa
AA seq
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MKQQIYNTALYLRLSRDDELQGESSSITTQRSMLRLYAKEHHLNVIDEYIDDGWSGTNFE
RPSFQRMIEDIEAGKINCVVTKDLSRLGRNYIMTGQYTELYFPSHNVRYIAIDDGVDSEK
GESEIAPFKNIINEWVARDTSRKVKSAFKTKFAEGAHYGAYAPLGYKKHPDIKGKLLVDD
ETKWIVEKIFSLAYQGYGSAKITKVLREEKVPTASWLNFTRYGTFAHIFEGKPESKRYEW
TIAHVKAILKSEVYIGNSVHNMQSTVSFKSKKKVRKPESEWFRVENTHEPIIDKEVFYRV
QEQIKSRRRQTKEKATPIFAGLVKCADCGWSMRFATNTANKTPYSYYACSYYGQFGKGTC
SMHYIRYDVLYQAVLKRLQYWAKAVQQDEEKVLNKIQKAGNAERIREKKKKASAFKKAEN
RQNEIDRLFAKMYEDRACEKITERNFVMLSSKYQKEQIELEQQITNLREELSKMEQDMIG
AEKWIELIKEYSVPKELTAPLLNAMIEKILIHEAITNEDNERIQEIEIYYRFIGKVD
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaacagatttacaatactgcactttatcttaggttaagccgagatgatgaatta
cagggcgaaagttccagcattaccacacaaagaagtatgttgcgtctatatgcaaaagaa
catcatttgaatgtgattgatgaatatattgatgacggctggtcgggaacaaattttgaa
agaccgagttttcaaagaatgattgaggatatagaggcaggaaaaatcaactgtgttgta
acgaaagacctttcccgacttggcaggaactatattatgacaggacaatatacagaattg
tattttcccagccataatgtccgttacatagcgattgacgacggtgtagacagcgagaaa
ggcgaaagtgagattgcaccatttaagaacatcatcaatgaatgggtggcaagagataca
agccgtaaagtgaaatcggcatttaagacgaaatttgcagagggtgctcattatggtgct
tatgctccattaggatataagaaacaccctgacatcaaaggaaaactgctggttgatgat
gaaacaaaatggattgttgaaaaaatcttttccctagcctatcaaggttatggtagtgcc
aaaatcacaaaggtactgcgagaggaaaaagttccgacagcgtcttggctgaattttaca
aggtacggtacttttgcacatatctttgagggaaagcccgaaagcaaacgttatgagtgg
acgattgctcatgtcaaggcaatcttaaaaagtgaggtttatataggcaacagcgttcac
aatatgcagtctacggtttcattcaagagcaagaagaaagtgcgtaagcccgaaagtgaa
tggtttcgagtggaaaatacccatgaaccgattattgacaaagaagtgttctatcgtgtg
caggaacagataaaatcaagacgtagacagacaaaggaaaaagcaacaccgatatttgca
gggcttgtcaagtgtgcggattgtggctggtctatgcggtttgcaacgaatacggcaaat
aaaacgccttacagttattatgcttgcagttactacgggcagtttggcaaaggtacttgt
tctatgcactatatccgttatgatgtgttgtatcaagccgtattgaaacgattgcagtat
tgggctaaggcagtacagcaggacgaagaaaaggtgctgaacaagatacagaaagcaggc
aatgcagagcgaatacgggaaaagaagaaaaaggcaagtgcctttaagaaagccgagaac
cgacaaaatgaaattgaccgtttgtttgcgaaaatgtatgaagatagagcctgtgagaag
ataacagagcgaaattttgtgatgttgtctagcaagtaccaaaaagaacaaatagaactg
gaacagcagataaccaacctaagagaagaattaagtaaaatggaacaggatatgataggt
gctgaaaagtggattgagttaatcaaggagtattccgtaccaaaggaactgacagcaccg
ttattaaatgcaatgatagaaaaaatccttattcatgaagcaataacgaatgaggataac
gaaagaatacaggaaatagagatatattaccgatttattggaaaagtagactga
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