Clostridioides difficile CD196: CD196_3000
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Entry
CD196_3000 CDS
T00997
Name
(GenBank) MerR-family transcriptional regulator
KO
K21745
MerR family transcriptional regulator, aldehyde-responsive regulator
Organism
cdc
Clostridioides difficile CD196
Brite
KEGG Orthology (KO) [BR:
cdc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cdc03000
]
CD196_3000
Transcription factors [BR:
cdc03000
]
Prokaryotic type
Helix-turn-helix
MerR family
CD196_3000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MerR_1
MerR
MerR-DNA-bind
DUF3450
SPAM
PhoU
DUF5320
HTH_17
HTH_91
ATG14
Motif
Other DBs
NCBI-ProteinID:
CBA66072
UniProt:
A0A0H3N649
LinkDB
All DBs
Position
complement(3555772..3556185)
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AA seq
137 aa
AA seq
DB search
MTISEVSKKYELSADTLRYYERIGLIPPVNRNKSGIRSFTEEDCEWVNFIKCMRGAGLSI
ETLIEYVAMFQQGSSTIKARKELLIEQRNQLAKRIEEMQKTLERLNFKIDRYEEGIIEKE
KVLKSSRNKKMEAVSYE
NT seq
414 nt
NT seq
+upstream
nt +downstream
nt
atgacgatttcagaagttagtaaaaaatacgagctttcagcggatactttacgatattat
gaacgaattggtttaataccacctgtaaatagaaataaaagtggaattaggtcttttaca
gaagaagattgtgagtgggttaatttcataaagtgtatgagaggtgcaggtctttctatt
gagacattaattgagtatgtagctatgtttcaacaagggagcagtactatcaaagctaga
aaagaacttttaatagagcagagaaaccaactagcaaaaagaatagaagaaatgcaaaaa
actttggaacgattaaattttaagattgatagatatgaagaaggtattattgagaaagaa
aaagtattaaagagcagtagaaataagaaaatggaggcagtatcttatgagtaa
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