Clostridioides difficile CD196: CD196_3020
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Entry
CD196_3020 CDS
T00997
Name
(GenBank) putative Na+ driven multidrug efflux pump
KO
K26937
MATE family, multidrug efflux pump
Organism
cdc
Clostridioides difficile CD196
Brite
KEGG Orthology (KO) [BR:
cdc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cdc02000
]
CD196_3020
Transporters [BR:
cdc02000
]
Solute carrier family (SLC)
SLC47: Multidrug and toxin extrusion (MATE) family
CD196_3020
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Paralog
GFIT
Motif
Pfam:
MatE
Motif
Other DBs
NCBI-ProteinID:
CBA66133
UniProt:
A0A0H3N661
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Position
complement(3582188..3583591)
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AA seq
467 aa
AA seq
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MEEKYKEPLEYEKVSKLLTKYAIPSIIAMLVSALYNIVDQIFIGQGVGVLGNAATNVTFP
LTTICTAIALLLGIGGASKCSLELGAKNSEKATKAAGNSICLMAVFGISLFIVVSIFLTP
LLKFFGSTSEILPYAHTYTKITSIGLPFLIMSTGMSKLILADGRPKASMFCMLIGAVINT
ILNPLFIFVFNMGIAGSALATVIGQLISFGISVHYIKNFQHIKLHKKSFKLDSIIYKHIF
ALGSSSCFNQLAMTVTQIVMNNTLAYYGARSVYGSEIPLACVGIIIKVNMIFISIIIGIS
QGMQPIIGYNYGAEKYNRVKEAYKFAVGSATIISVIAFLCFQFFPRQITSIFGNGNETYF
IFAEHYFRTFLFLTFINGVQIVSSTFFTSIGKSVLGLFTSLTRQILFLIPLIVILPMFMG
IDGVMFAGPIADAAAAMVCIYFAVHEMKSLTIKQNNLMSNHNKIAEV
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaaaatataaggagccattggaatatgaaaaggtttcaaagttattaactaag
tacgcaattcctagtattatagcaatgttagtaagtgctttatataacattgttgaccaa
atatttattgggcaaggtgttggtgtattgggtaatgctgctacaaatgtcacttttcca
ctaacaacaatatgtactgcaattgcattattattaggaattggaggagcgtctaagtgt
tcattggaattaggtgctaaaaattcagaaaaagctacaaaagcagcaggaaattctata
tgcttgatggctgtttttggaataagtttatttatagtagtatcaatatttttaacacca
ctattaaaattctttggctctacatcagaaatactaccttatgcacacacatatacaaaa
attacatcaattggattaccatttcttataatgtccactggaatgagtaaattgatactt
gcagatgggagaccaaaagcttctatgttttgtatgttaataggagcagttattaataca
attttgaatccattattcatttttgtttttaatatgggaattgctgggtctgctttagca
actgttattgggcaacttatatcttttggaataagtgttcattatataaagaattttcaa
catattaaattacataagaaaagttttaaattagatagtataatttataaacatatattt
gcgctaggttcaagctcatgttttaatcaattagcaatgactgtaacacagatagttatg
aataatacattggcatattatggggctaggtcagtttatggaagtgagattccacttgct
tgtgtcggtatcattattaaagtaaatatgatttttatatctataattattggtatatca
caaggtatgcaaccaattatagggtataattatggggctgaaaagtataatcgtgtaaaa
gaagcatataagtttgcagtgggaagtgcaactattatatctgttattgcattcttatgt
ttccaattcttcccaagacaaattacgtctatatttggtaacggaaatgagacttatttt
atatttgcagaacattattttagaactttcttgttcttaacatttataaatggtgttcaa
atagtatcatcaactttctttacatcaattgggaaatcagtgttgggactttttacttct
ttgactcgtcaaattttatttttaattccattgatagtaattttaccaatgtttatggga
attgatggagtaatgtttgcaggaccaatagcagatgcagcagcggcaatggtatgtata
tactttgcagttcatgaaatgaaatccttgactataaagcaaaataatttgatgagtaac
cataataagattgcagaggtataa
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