Clostridioides difficile CD196: CD196_3068
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Entry
CD196_3068 CDS
T00997
Symbol
valS
Name
(GenBank) valyl-tRNA synthetase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
cdc
Clostridioides difficile CD196
Pathway
cdc00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cdc00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CD196_3068 (valS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cdc01007
]
CD196_3068 (valS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cdc03016
]
CD196_3068 (valS)
Enzymes [BR:
cdc01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
CD196_3068 (valS)
Amino acid related enzymes [BR:
cdc01007
]
Aminoacyl-tRNA synthetase
Class I (U)
CD196_3068 (valS)
Transfer RNA biogenesis [BR:
cdc03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
CD196_3068 (valS)
Prokaryotic type
CD196_3068 (valS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
Val_tRNA-synt_C
tRNA-synt_1_2
tRNA-synt_1e
RUBY_RBDX
DUF7130
DUF7129
DUF1664
tRNA-synt_1f
zf-C2HC5
Zn_ribbon_8
GapR_DNA-bd
HypA
DUF6487
DZR
tRNA-synt_1b
Uds1
Spt4
Zn_Ribbon_TF
Motif
Other DBs
NCBI-ProteinID:
CBA66224
UniProt:
A0A0H3NFQ8
LinkDB
All DBs
Position
complement(3636881..3639547)
Genome browser
AA seq
888 aa
AA seq
DB search
MENTNLSKTYNPKDFEARLYKKWMDEGYFKSKPNPDKKPFTIMMPPPNITGQLHMGHALD
HTLQDILIRWKRMDGYEAFWLPGTDHASIATEVKVVERIKKQEGKTKYEIGREEFLKRAW
EWKDEFGGKISNQLKQLGDSCDWDKERFTMDEGCNEAVIEFFVSLYEKGHIYRGNRIINW
CPDCKTTLSDAEVEHEEHDGNFYHIKYPLKDSEDFLEIATTRPETMIGDTGIAVNPEDDR
YKHLIGKTAILPLVGRELPIVADSYVDLEFGTGAVKMTPAHDPNDFEVGLRHNLEQLNTM
NEDGTMNEVCGKYEGMDRFECRKAIVADLKEQGYLIKIKAHNHNVGTCYRCHTVVEPRLS
EQWFVKMEELAKPAIDILKKGELEFVPDKFDKTYLQWLENIRDWCISRQLWWGHQIPAYY
CQECGEIVVARKMPDKCPKCGSTHFKQDEDALDTWFSSALWPFSTLGWPNKTEALDYYYP
TSVLVTGYDIIFFWVVRMAFAGMFCMNEKPFDHVLVHGLVRDSQGRKMSKSLGNGIDPLE
IIEQYGADALRFTLTTGNSPGNDMRFYMERVEFARNFANKLWNASRFVFMNIDEDIIKNM
TRESVKEDLTLADKWIISRANNIVKEATNNMDKFDLGIALQKIYDFTWSEYCDWYIEMVK
PRLYGEDANAKSAALYTLTYVLEKILKLLHPYMPFITEEIYTHLPTVEGCIIVSEWPKYN
EEDNMAEEEDMMNLLMEGIRSIRNVRAEMNVPPSKKAKLIIIPSEEKIEAIELGKDYFIT
LASASNVEIAKDKSNVPEDAVGVVIDGVEIFIPLNELVDFEKEIERLSKEKKKLEGEIKR
VNGKLANQGFLAKAPESLIEEEKVKKEKFEEMIKSVEERLTNLESKIK
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatacgaatttatcaaaaacttataacccaaaagattttgaggctaggctatat
aaaaaatggatggatgaagggtattttaaatctaaaccaaatccagataaaaaaccattt
acaataatgatgccaccaccaaatataacagggcaattgcatatgggacacgctcttgac
catacacttcaagatatattaatcagatggaaacgtatggatggatatgaagctttttgg
cttccaggaactgaccatgcttctatagcaacagaagttaaagttgttgaaagaataaaa
aaacaagaaggcaagacaaagtatgaaataggtagagaagaatttttaaagagagcctgg
gaatggaaagatgaatttggaggaaaaatatctaatcagcttaaacaactaggtgattct
tgtgattgggataaagaaagatttactatggatgaagggtgtaatgaagcagttatagaa
ttttttgtaagcctatatgaaaaaggtcacatatacagaggaaatagaataataaactgg
tgcccagattgcaaaactactttatcagatgcagaagttgaacatgaagaacacgacgga
aacttttatcatataaagtacccactaaaagatagtgaagactttttagaaatagctaca
actagacctgagacaatgataggagatactggtatagcagtaaatccagaagatgataga
tataaacatttaataggaaaaacagcaatacttccattagtaggaagagaacttccaata
gttgcagatagttatgttgatttagagtttggaactggtgcagttaagatgactccagca
catgaccctaatgattttgaagtaggattaagacataatcttgagcagttaaatactatg
aatgaagatggaactatgaatgaagtttgtggaaaatatgaaggtatggatagatttgag
tgtagaaaagctatcgtagcagacttaaaagaacaaggttacctaattaagataaaagcg
cataatcataatgtaggaacttgttatagatgccatacagtagttgagcctagattatca
gagcaatggtttgttaagatggaagaacttgcaaaaccagctatagatattcttaaaaaa
ggagaattagaatttgttccagataaatttgataaaacttatttacaatggctagaaaat
ataagagattggtgtatatcaagacaattatggtggggtcatcaaataccagcttattat
tgtcaagagtgtggagaaatagtagttgctagaaaaatgccagataagtgtcctaaatgt
ggaagcactcattttaaacaagatgaagatgccttagatacttggttcagttctgcatta
tggcctttctctactctaggatggccaaataagactgaagctttagattattattatcca
acaagtgtacttgttacaggatacgatataatattcttctgggtagttagaatggcattt
gcaggtatgttctgtatgaatgaaaagccatttgaccatgttttggttcatggattagta
agagattctcaaggtagaaaaatgagtaaatctttaggaaatggtatagacccattggag
ataatcgagcaatatggagctgatgccctaagatttacattaacaactggaaattcccca
ggaaatgatatgagattctatatggaaagagtagaatttgctagaaactttgcaaataag
ttgtggaatgcatcaagatttgtatttatgaatattgatgaagatataattaaaaacatg
actagagaaagtgttaaagaggacttaactctagctgataaatggataatatcaagagca
aataatattgtaaaagaagcaactaataacatggataagtttgatttaggaatagcactt
caaaagatatacgattttacttggtcagaatactgtgactggtatattgaaatggttaaa
cctagattatatggggaagatgcaaatgctaaatctgcagcattatatacattaacttat
gttcttgaaaaaatattaaaattattacatccatacatgccatttataacagaggaaata
tatactcatcttcctactgttgaaggatgtataatagtatctgaatggccaaaatataat
gaagaagataacatggctgaagaagaagatatgatgaacttattgatggaaggtataaga
agtataagaaatgtgagagcagaaatgaatgtaccaccttctaagaaagctaaattgata
ataatcccaagtgaagaaaaaatagaagctattgagcttggtaaagactattttataact
ctagcatctgcttcaaatgtagagatagcaaaagataaatctaatgttccagaagatgca
gttggagtagttattgatggtgttgaaatatttatacctcttaatgaattagttgatttt
gaaaaagaaattgagagattgtctaaagaaaagaaaaagttagaaggcgaaataaagaga
gttaatggaaagcttgcaaatcaaggtttcttagcaaaagctcctgaaagtttaattgaa
gaagaaaaagtaaaaaaagaaaaatttgaagagatgattaaatctgttgaggaaagatta
acaaatttagaatctaaaataaaataa
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