Clostridioides difficile CD196: CD196_3108
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Entry
CD196_3108 CDS
T00997
Name
(GenBank) hypothetical protein
KO
K02662
type IV pilus assembly protein PilM
Organism
cdc
Clostridioides difficile CD196
Brite
KEGG Orthology (KO) [BR:
cdc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
cdc02044
]
CD196_3108
02035 Bacterial motility proteins [BR:
cdc02035
]
CD196_3108
Secretion system [BR:
cdc02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
CD196_3108
Bacterial motility proteins [BR:
cdc02035
]
Pilus system
Pilus assembly proteins
CD196_3108
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PilM_2
Motif
Other DBs
NCBI-ProteinID:
CBA66302
UniProt:
A0A0H3NFU0
LinkDB
All DBs
Position
complement(3684384..3685256)
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AA seq
290 aa
AA seq
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MAIIKKILNLEINDDYIRLVFLRKSHKKVFIDKSIIKEINFDIKNDSNSIEKIKYIEDVV
RFVKEEIGKSKILYKNLYFNIQIQDIVIRNVEVLNTKKKRDILSMIEFEITQYIPININN
YSIKYKVINSKNDKLNIQVILFPKSIIQLIKNISENLNMNPKTININFDILQKLINLNLI
ENFSEEGVFIECKKSQLIINITKDKKIRETYLLSKEGKSYEFIKRLLRDFKYVYYYGIEN
CFIEEYFKYTDKSIEVNPLRLKDKVKVENNFDADLEDNRINYINSIGMII
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atggctataattaaaaaaattctaaacttagaaataaatgatgattatataaggcttgta
tttttaagaaaaagtcataaaaaagtttttatagataaatcaattataaaagagattaac
tttgatataaaaaatgatagtaattcgattgagaagattaaatatatagaagatgtagtt
agatttgtaaaagaggagattggtaaatcaaaaatattatataaaaatttatactttaac
attcaaattcaagatatagtcattagaaatgttgaagttctaaatactaagaaaaaaaga
gacatattaagcatgattgaatttgaaataacacaatacattccaataaacataaataac
tattcaataaaatataaagttataaattctaaaaatgataaattgaatatacaagtaatt
cttttcccaaagagtattattcaattaattaagaacatttcagaaaatctaaatatgaat
ccaaagactataaatataaattttgatatattacaaaagcttataaacttaaatttaata
gagaatttttcagaagaaggggtatttatagaatgtaaaaaaagtcagttaattataaat
ataacaaaagataaaaaaataagagaaacatacttgctatcaaaagagggaaaatcatat
gagttcataaaaagattattaagggattttaagtatgtttattactatggtatagaaaat
tgttttattgaagaatactttaaatatacagataaatctattgaagtaaatccattaaga
ttaaaagataaagtaaaagtagaaaataattttgatgcagatttagaagacaataggata
aattatataaatagtataggaatgattatttaa
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