Clostridioides difficile CD196: CD196_3111
Help
Entry
CD196_3111 CDS
T00997
Name
(GenBank) putative type IV pilus-assembly protein
KO
K02652
type IV pilus assembly protein PilB
Organism
cdc
Clostridioides difficile CD196
Brite
KEGG Orthology (KO) [BR:
cdc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
cdc02044
]
CD196_3111
02035 Bacterial motility proteins [BR:
cdc02035
]
CD196_3111
Secretion system [BR:
cdc02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
CD196_3111
Bacterial motility proteins [BR:
cdc02035
]
Pilus system
Pilus assembly proteins
CD196_3111
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T2SSE
MshEN
nSTAND3
AAA_22
ATPase_2
AAA_16
AAA_11
Rad17
ResIII
AAA_7
cobW
AAA_29
AAA
AAA_19
AAA_30
AAA_14
SRP54
DUF87
NPHP3_N
RNA_helicase
PET122
ABC_tran
PIF1
AAA_23
FtsK_SpoIIIE
NTPase_1
TsaE
DEAD
Filo_glycop
AAA_5
SHS2_Rpb7-N
AAA_33
Motif
Other DBs
NCBI-ProteinID:
CBA66307
UniProt:
A0A0H3NBC4
LinkDB
All DBs
Position
complement(3686978..3688357)
Genome browser
AA seq
459 aa
AA seq
DB search
MINIILEESSLPMLIPEKLAKKYNVFPVEFQDDNLVVEIEDEDIYALQDLRLATGKEIIL
KKEKKELISEKIEKYYNSFELDEDYAKKLFENLLEKAIKENASDIHIEPFKEHLIVRMRV
DGELKEVSKFLVDVYPSLSTVIKLKASMDITEKRLPQDGRVDIKLGGNLIDIRVSSIPTV
YGEKIVLRILNRDTFLKDKLELGFSEEAIKSINRIINKRAGVLLVTGPTGSGKTTTVYSL
LNDLKGINKNIMTIENPVEYKMDGISQIQVNSKVGLSFDVGLRAILRQDPDIIMVGEIRD
AETAKIAVRAAITGHLVISTLHTNDAVSSIARLLEMQIPPYLLNASLIGVISQKLVRKVC
NHCSHEIMIKDNFSGDVNTKVAVGCEKCNDKGYFGRTAIYEILEINDDIKTCIRNMEDSS
TIKDVAQNNGMITFEDSCKRLINEKITTLEECLVVNEMI
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
gtgattaatattatattagaggaaagcagtttgccaatgttaataccagaaaaacttgca
aagaaatataatgtatttccagttgagtttcaagatgataatttagttgtagaaatagaa
gatgaggatatttatgctctacaggacttgagattagctacaggtaaagaaattatattg
aagaaggagaaaaaagaacttataagtgaaaagattgaaaaatattataatagctttgaa
cttgatgaggattatgcaaaaaaattatttgaaaatcttttagaaaaagctataaaagaa
aatgcaagtgatatacatatagaaccatttaaagaacatttaatagtgagaatgagggta
gatggagaactaaaggaagtatcaaagtttttagttgatgtctatccatcattgtctacg
gttataaaattaaaggcatcaatggatataacagaaaaaaggcttcctcaggatggtagg
gtggatataaagttaggtggaaatttaattgacattagagtttcatcaataccaactgtc
tatggtgaaaaaatagttttgaggatacttaatagagatacttttttaaaagacaaatta
gaacttggtttttcagaggaagctataaaatctataaatcgtataataaataaaagagca
ggagtattattagtgacaggtcctacaggtagtggaaagactacaacagtatattcctta
ttaaatgatttaaaaggaataaataaaaatattatgactatagaaaatcctgtagagtat
aagatggatggcataagtcagattcaagtaaattcaaaagtagggttgagctttgatgta
ggtcttagagcgatattaagacaagacccagatataataatggtcggagaaataagagat
gcagaaacagctaagatagcagtaagagcagctataacaggtcatttagttataagtact
ttacatactaatgatgcagtatcttccatagctagattactagaaatgcaaataccacca
tatcttttaaatgcctctcttataggtgttatatctcaaaagttggttagaaaagtttgt
aatcattgtagccatgagattatgataaaagataattttagtggagatgtaaatactaag
gtagctgtagggtgtgaaaaatgtaatgataaaggatactttggaagaacagcaatttat
gaaatcttagaaattaatgatgatataaagacatgtataagaaatatggaggattctagt
actattaaagatgtggcacaaaataatggaatgataacatttgaagatagctgtaaaaga
ctaataaatgaaaaaataacgacattagaagagtgtttagtagtaaatgaaatgatttaa
DBGET
integrated database retrieval system
