Clostridioides difficile CD196: CD196_3169
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Entry
CD196_3169 CDS
T00997
Name
(GenBank) putative RNA methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
cdc
Clostridioides difficile CD196
Brite
KEGG Orthology (KO) [BR:
cdc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cdc03009
]
CD196_3169
Enzymes [BR:
cdc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
CD196_3169
Ribosome biogenesis [BR:
cdc03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CD196_3169
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
TRAM
MTS
Methyltransf_25
Cons_hypoth95
PrmA
Methyltransf_15
TRM5-TYW2_MTfase
RrnaAD
N6_N4_Mtase
Methyltransf_11
CMAS
Methyltransf_4
DOT1
PCMT
Motif
Other DBs
NCBI-ProteinID:
CBA66419
UniProt:
A0A0H3N7V9
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All DBs
Position
complement(3752090..3753448)
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AA seq
452 aa
AA seq
DB search
MLSKNEMYIVDIVDIGQGGVGVGKYNGITVFVEGGLIHDKVKVRINKVKKNYAEGDIVEI
IEKSPFRVKRVCSDNLRDCGGCQIQDLDYNKQLEMKTNEVKQVLSRIGKLEDVEVHDTIG
MDNPYRYRNKAQFPIQKNNGIPIIGFYKKKTHDVISTEKCVIQHEINDKIVKIIKTYIRA
YKVSIYDEKTHTGLIRHLVTKIGFTTKEVMVVLVANGNKLPYLKELASVLKENIPGFKTL
VVNVNQKDTNAILGRENIVIYGDGKINDYIGDLVFEISPLSFFQVNPVQTKVLYDKALEY
ANLNDTDTVFDIYCGIGTISLFLAQKAKKVYGIEIIDDAIKDAKINAKLNNIHNAEFYVG
KAEEIVPKMYREGKTANVVVVDPPRKGCDEKVLETIVSMNPERIVYVSCNPSTLARDLDY
LNVHGFKCVEAQPVDMFPHSTHVETVAKIIKQ
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgctttcgaaaaacgagatgtatattgtagatatagtagacattggtcaaggcggagta
ggagtaggaaagtacaatggtattacagtttttgtagagggcggattaatacatgataaa
gttaaagttaggattaataaagtaaagaaaaattatgctgagggagatattgttgagata
atagaaaagtctccattcagggtgaaaagagtgtgtagtgacaatcttagggattgtgga
gggtgtcagatacaagatttagattataataaacaacttgaaatgaaaacaaatgaagtt
aaacaagtactttcgagaataggtaagttagaggatgtagaagttcatgacactatagga
atggataatccatatagatatagaaataaagcacaatttccaatacaaaagaataatggt
attccaattattggcttctataaaaagaagactcatgatgtaatatcgacagaaaaatgc
gtaatacaacatgagataaatgataaaattgttaaaataataaaaacatatataagggcc
tataaggtaagtatatatgatgaaaagactcacacggggttgattaggcatttagtaaca
aaaataggttttacaactaaagaagtaatggttgtattagtagcaaatggaaacaaactt
ccatatcttaaagaattagcttcagtgcttaaggaaaatatacctggatttaagactttg
gttgtaaatgtaaatcaaaaagatacgaatgctattctaggaagagaaaatatagttata
tatggagatggaaaaataaacgattatataggtgacttagtgtttgagatttcaccatta
tcatttttccaagtaaaccctgtccaaactaaagtattgtatgataaggctcttgaatat
gcaaatttaaatgatactgatactgtttttgatatttactgtgggataggtacaatatct
ttatttttggcacaaaaggctaaaaaggtttatggaatagaaattatagatgatgccata
aaagatgctaagataaatgctaaattaaacaatatacataatgctgaattttatgttgga
aaggcagaggaaattgtacctaagatgtatagagagggtaagactgccaatgtagtagtt
gtagacccacctagaaagggatgtgacgaaaaggtattagagactattgtttcaatgaat
ccggaaagaattgtctatgtttcttgtaatccttctactttagcaagggatttagactat
ctaaatgttcacggatttaaatgtgttgaggcacaacctgtagatatgttccctcattct
acacatgtggaaactgtagctaagataatcaagcaatag
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