Clostridioides difficile CD196: CD196_3176
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Entry
CD196_3176 CDS
T00997
Name
(GenBank) putative ATP-binding protein
KO
K06958
RNase adapter protein RapZ
Organism
cdc
Clostridioides difficile CD196
Brite
KEGG Orthology (KO) [BR:
cdc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cdc03019
]
CD196_3176
Messenger RNA biogenesis [BR:
cdc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
CD196_3176
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapZ-like_N
PapZ_C
AAA_18
AAA_22
AAA_28
SKI
HTH_58
Motif
Other DBs
NCBI-ProteinID:
CBA66433
UniProt:
A0A0H3NBI4
LinkDB
All DBs
Position
complement(3762905..3763762)
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AA seq
285 aa
AA seq
DB search
MKFVIVTGLSGSGKSETMRALEDMGFYCVDNLPPALITKFAELCYQPNSSIDKVALGIDI
RGRKFFEALHESLNYLEKENYEYEMVYLDCNDDVLLKRYKMTRRNHPLAKDMQIPEGIKM
ERKIMEPLKELSTCIIDTTNMKPKDLKEEIKKIYSSGEDNPNLTISVVSFGFKHGILADA
DLVFDVRFLPNPYYVEELRAKTGDDKEVRDYVMNSKISEEFYVKLLDMIHFLVPQYIDEG
KQHLVIGVGCTGGRHRSVTITNLIAEDLSNKGYRVVKKHRDSMLR
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttgttatagttacaggtctttcaggatctggaaaaagtgagacaatgagagct
ttagaggatatgggattttattgtgtagataatctacctcctgctttgataactaaattt
gcagaattatgttatcaaccaaattcaagtattgataaagttgctctagggatagatata
agagggagaaagttttttgaagcgcttcatgaaagcttaaattatttagaaaaagaaaat
tatgaatatgaaatggtatatttggactgtaatgatgatgtattgttaaagagatataaa
atgacaagaagaaatcatccattggcaaaagatatgcagattccagaaggtataaaaatg
gaaagaaagataatggaacctttaaaggagttatctacatgtataattgatacaactaac
atgaaacctaaagaccttaaggaagaaataaagaaaatatattcttctggtgaagataat
ccaaacctaactatttctgtagtatcttttggatttaaacatggtatacttgctgatgca
gatttagtatttgatgtaagatttcttccaaatccctattatgttgaagagttaagagct
aaaactggtgatgataaagaagttagagattatgttatgaattctaaaatcagtgaagaa
ttttatgtgaaacttttagatatgattcattttttagtacctcaatatatagatgaagga
aaacaacatctagtaattggtgttggatgcacaggtggaagacataggtcagttactata
acaaatcttatagcggaggatttatctaataagggatatagagttgtaaagaaacataga
gactctatgttgcgataa
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