Clostridioides difficile CD196: CD196_3287 Help Entry CD196_3287        CDS       T00997                                  Symbol hupA Name (GenBank) DNA-binding protein HU   KO K03530   DNA-binding protein HU-beta Organism cdc  Clostridioides difficile CD196 Brite KEGG Orthology (KO) [BR:cdc00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:cdc03032]     CD196_3287 (hupA)    03036 Chromosome and associated proteins [BR:cdc03036]     CD196_3287 (hupA)    03400 DNA repair and recombination proteins [BR:cdc03400]     CD196_3287 (hupA) DNA replication proteins [BR:cdc03032]  Prokaryotic type   DNA Replication Initiation Factors    Initiation factors (bacterial)     CD196_3287 (hupA) Chromosome and associated proteins [BR:cdc03036]  Prokaryotic type   Nucleoid associated proteins    HU (heat unstable protein)     CD196_3287 (hupA) DNA repair and recombination proteins [BR:cdc03400]  Prokaryotic type   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHIIR (short-homology-independent illegitimate recombination)      Supressor       CD196_3287 (hupA) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Bac_DNA_binding HU-CCDC81_bac_2 HU-HIG HU-CCDC81_euk_2 Peptidase_C80 HU-CCDC81_euk_1 HK-GC-Chemotax_sensor Motif Other DBs NCBI-ProteinID:  CBA66647 UniProt:  A0A0H3N6W9 LinkDB All DBs Position complement(3884720..3884998) Genome browser AA seq 92 aa AA seqDB search MNKAELVSKMAEKSGLTKKEAEAALNAFMSSVQDALVNNEKVQLVGFGTFETRERAARQG RNPRDPEQVIDIPASKAPVFKAGKGLKDIING NT seq 279 nt NT seq  +upstreamnt  +downstreamnt gtgaataaagctgaattagtatcaaagatggcagaaaaaagtggattaacaaagaaggaa gcagaagctgcgttaaacgcatttatgagttctgttcaagatgcactagtaaataatgaa aaagttcaattagttggatttggaacatttgagacaagagaaagagctgctagacaagga agaaatccaagagatccagagcaagttatagatataccagcttctaaagcaccagttttc aaagctggaaaaggattaaaggatataataaatggataa

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