Clostridioides difficile CD196: CD196_3301
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Entry
CD196_3301 CDS
T00997
Name
(GenBank) putaive membrane protein
KO
K02662
type IV pilus assembly protein PilM
K02663
type IV pilus assembly protein PilN
Organism
cdc
Clostridioides difficile CD196
Brite
KEGG Orthology (KO) [BR:
cdc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
cdc02044
]
CD196_3301
02035 Bacterial motility proteins [BR:
cdc02035
]
CD196_3301
Secretion system [BR:
cdc02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
CD196_3301
Bacterial motility proteins [BR:
cdc02035
]
Pilus system
Pilus assembly proteins
CD196_3301
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PilN
PilN_bio_d
PGA28-like_dom
Motif
Other DBs
NCBI-ProteinID:
CBA66674
UniProt:
A0A0H3NBW9
LinkDB
All DBs
Position
complement(3900355..3902067)
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AA seq
570 aa
AA seq
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MNKVYVSYYGDSISIVEGRYKHDKDKFYVKNFNVFSIEDIAQDFSKEKYALLRYALENVK
LKSRHVVFCLNTRDVILKPQKLPNMDKKDLDGFMKLEMDEMMALESDEYVFSYEVSSETH
DNSDGDESSLNLIIGAIQKEEVNAIVEIMHEFDLVLDRIDTLSTAYLRMLKNLDYNDIMV
TNISDNSTIINIYKKDTLFISDNIPIKITAKDMDMQLLNVVEESKGLMNYYSSRNFGKVT
DTILILGKRYSNKLIYETFSSAFSSYVSQGLTEIMDISDMITGDIDEDDINSIVELLGSM
IEPKGKRDFENINFLPMDILRKQIKAKQMKNILKIAPIVILILAIPYLCLIFSNNLANKE
LENVNGEIRNIESAYYQIGNIEKMIQSKSEEIKVYDMLIGKKVKWENLLDDIDKNTPSKV
ELTSLSTTYQNLGTNNKADNSKSNKTTTDKSSNNETKSSTKSDSNGDKTDNDLNEDKTTN
VSEALTGNSETNSNNTDKDDKTPLYDKIPNVINIEGNAKDSSYVGQFLYKLKGLYYFKDV
KLHSIKSNAEDSNYTFSMTLYLKEGVLTNE
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgaataaggtttatgtatcatattatggcgattctatttccatagttgagggcagatat
aaacacgataaggataagttttatgtaaaaaattttaatgtgttttcaatagaggatatt
gcacaagatttttctaaggaaaagtatgctctattgagatacgcattagaaaatgttaag
ttaaaatcaagacatgtagttttttgtttaaatacaagagatgtaattttaaaaccccaa
aaacttcctaatatggacaaaaaggatttagatggatttatgaagctagagatggacgaa
atgatggctttggagtcagatgaatatgtattttcgtatgaagtatctagtgaaacacat
gataattcagatggcgatgaatcaagcttaaatcttatcattggagctatacaaaaggaa
gaggtaaatgcaattgtagagataatgcatgaatttgatttagtattagatagaatagat
acattatcaacagcttacttaagaatgcttaaaaatttagactacaatgatataatggta
accaatataagtgacaatagtacaattataaatatatataagaaagatactttatttatt
agtgataatatacctataaagataactgctaaagatatggacatgcaattattaaatgta
gtagaagaatcaaaaggtcttatgaattactattcgtcaagaaactttggtaaggttacg
gatactatattaatattaggaaaaagatattccaataaattaatttatgaaacttttagc
tctgcattttcaagctatgtttctcaaggccttactgagataatggatatatctgatatg
ataactggagatatagatgaagatgatataaattcaattgtagagcttttaggaagtatg
atagaacctaaagggaaaagagattttgaaaatataaactttttaccaatggatatactt
agaaaacagataaaagctaaacaaatgaaaaacatactgaaaattgctccaatagttatt
ttgattcttgctataccttatttatgtttaattttttcaaataatttagcaaataaggaa
cttgaaaatgttaatggtgaaataagaaatattgaatctgcatattatcagattggaaat
atagaaaaaatgatacagagtaaaagcgaagaaataaaggtatatgatatgttaattggg
aaaaaggtaaagtgggaaaatttattggatgatatagataaaaatactccaagtaaagtt
gaactaacaagtttatcaacaacttatcaaaatcttggaactaataataaagctgataat
tcaaaaagtaataagactacaacagataaatcaagtaacaatgaaacaaaatcaagtacg
aaaagtgatagtaatggagataaaacagataatgatttaaatgaagataagactacaaat
gtgtcagaagcattaactggaaatagtgagactaatagtaataacacggataaagatgat
aaaactccattgtatgataagataccaaatgttataaatatagaaggaaatgctaaagat
tcctcttatgtaggtcaatttttatataaattaaagggattatactatttcaaggatgtt
aaattacatagcataaaaagtaatgcagaagattctaactatacatttagtatgacatta
tacctgaaagaaggtgtattaactaatgaataa
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