Clostridioides difficile CD196: CD196_3343
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Entry
CD196_3343 CDS
T00997
Symbol
lysS
Name
(GenBank) lysyl-tRNA synthetase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
cdc
Clostridioides difficile CD196
Pathway
cdc00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cdc00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CD196_3343 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cdc01007
]
CD196_3343 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cdc03016
]
CD196_3343 (lysS)
Enzymes [BR:
cdc01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
CD196_3343 (lysS)
Amino acid related enzymes [BR:
cdc01007
]
Aminoacyl-tRNA synthetase
Class II (A)
CD196_3343 (lysS)
Transfer RNA biogenesis [BR:
cdc03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
CD196_3343 (lysS)
Prokaryotic type
Other AARSs
CD196_3343 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
CBA66755
UniProt:
A0A0H3NGH1
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All DBs
Position
complement(3950226..3951755)
Genome browser
AA seq
509 aa
AA seq
DB search
MKNNQQSNEEAQIQEDLSEVLQVRRDKLKKLQESGRDPFKESRYDRTHYSMDIKDNFDSL
EGKTTKIAGRIMSKRIQGKAGFIDIQDQEGRIQSYVRLDAIGEEEYSVFSTYDIGDIVGI
EGEIFKTKKGEISVKAKSVVLLCKSLQVLPEKYHGLKDQELRYRQRYVDLIVNPEVKNAF
LIRTKALKALRAYLDDRGFLEVETPILNTIAGGANARPFITNHNTLHIPMYLRIANELYL
KRLIVGGFDKVYEMGRMFRNEGMDLKHNPEYTAIELYQAYADYTDMMEITENVIAHMAEV
ATGSMIVNYQGTEINFTPPWKRMSMEDCVKEYSGVDFSTINTDEEALEVAREKGIEIKPG
MRRGEVINAFFEEFGEDKLIQPTFITHHPVEVSPLSKRNVEDPRRTDRFEAFANKWELAN
AFSELNDPIDQKGRFIDQLRKRELGDDEAFEMDEDFLKALEVGLPPTGGLGIGIDRVIML
LTNSPSIRDVLLFPTMKPIDNNPNKEEEN
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaataatcaacaaagcaatgaagaagcgcaaattcaagaagaccttagtgaagta
cttcaagtaagaagagataaactaaaaaaattacaagagtcaggtagagatccttttaaa
gaaagtagatatgatagaactcattattctatggatataaaagataactttgattctctt
gaaggtaaaactacaaaaatagcaggacgtataatgagcaagagaatacaagggaaagct
ggctttatagatattcaagaccaagagggaagaatccaatcttatgtaagactagatgct
ataggagaggaagaatatagtgtattttcaacatatgatattggagatatagttggaatt
gaaggagaaatctttaaaactaaaaaaggtgaaatatctgtaaaggctaaatctgtagta
ttactatgtaaatctttacaagttttaccagaaaaatatcatggattaaaagaccaagaa
ctaagatatagacaaagatatgttgacttaatagtaaatccagaagtaaaaaatgctttt
ttaattagaacaaaagcattaaaagcattaagagcatacttagatgatagaggattttta
gaagttgagactccaatattaaatactatagcaggtggggcaaatgctagaccatttata
actaatcataatactttacatataccaatgtatttaagaatagcaaatgaattgtattta
aaaagacttattgttggtggatttgataaagtttatgaaatgggaagaatgtttagaaat
gaaggtatggatttaaaacataatcctgaatatactgcaatagaattatatcaagcatat
gcagactatactgatatgatggaaataacagaaaatgttattgcacatatggctgaagtt
gctacaggaagtatgatagttaactatcaaggaacagaaataaactttacaccaccttgg
aaaagaatgagtatggaagattgtgttaaagaatattctggtgtagatttttctactata
aatacagatgaagaggcactagaagttgctagagaaaaaggtatagagataaaacctgga
atgagaagaggagaagtaataaatgctttctttgaagaatttggagaagataaattaatc
caaccaacatttataactcatcatccagttgaagtatctccattatctaagagaaatgtt
gaagacccaagaagaactgatagatttgaggcatttgctaataagtgggagttagctaat
gcattttctgaacttaatgaccctattgaccaaaaaggaagatttatagaccaattgaga
aaaagagaattaggtgatgatgaagcttttgaaatggatgaagatttcttaaaagcatta
gaggtaggtctacctcctacaggaggactaggaataggtatagatagagtaattatgtta
ttaactaactctccatctataagagatgtattattattcccgactatgaaacctattgat
aacaatccaaataaagaagaagaaaactaa
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