Clostridioides difficile CD196: CD196_3356
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Entry
CD196_3356 CDS
T00997
Name
(GenBank) GntR-family transcriptional regulator
Organism
cdc
Clostridioides difficile CD196
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FCD
GntR
HTH_24
Fe_dep_repress
HTH_11
HTH_AsnC-type
TrmB
HTH_29
HTH_41
HTH_10
HTH_Crp_2
HTH_36
HTH_28
HTH_CodY
MarR
AbiEi_4
DUF5442
WH_CYT4
Motif
Other DBs
NCBI-ProteinID:
CBA66781
UniProt:
A0A0H3NC24
LinkDB
All DBs
Position
complement(3963646..3964326)
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AA seq
226 aa
AA seq
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MENLTKLNLDNYKPLRDVVFENLREAILEGKLKPGQRLMEVQLAEQLGVSRTPVREAIRK
LELEGLVVMLPRKGAYVANMSLKDIMDVLEVRASLEGLAAYLAAERISDEDIKKLKDISE
EFKKSTLESDVDALLKLDVEFHECIFKATNNKKLIQLINSLWEQVYRFRVTYMSAYDTSH
NIVEEHKYLLDAIIKGDSELSKKYATEHIEKAEQFMIDKAMISKDL
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
gtggagaatttaactaaactgaacttggataattacaagccattaagagatgtagtcttt
gagaatttaagagaagcaatcttagaaggaaaattaaagcctggtcaaaggctaatggaa
gtgcaactagcagaacaattaggagtaagtaggactccagtgagagaggcaataagaaag
cttgaattagaaggtttagtcgttatgttgcctagaaaaggtgcgtatgtggcaaatatg
tcattaaaggatattatggatgtattagaagtaagagcaagcctagaaggcttagcagca
tatcttgccgctgaaagaattagtgatgaagatattaaaaagcttaaagatatatcagaa
gaatttaaaaaaagcactttggaatccgatgtagatgcgttattaaaacttgatgtagaa
tttcatgaatgtatatttaaagcaactaataataaaaaattaatccaactaataaactca
ttatgggaacaagtatatagatttagagttacctatatgtctgcttatgatacatcacat
aatattgttgaagagcataaatacttacttgatgctataattaaaggtgatagtgagcta
tccaagaagtatgctacagagcatatagaaaaagcagagcagtttatgatagataaggct
atgattagtaaagacttataa
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