Clostridioides difficile CD196: CD196_3380
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Entry
CD196_3380 CDS
T00997
Symbol
pyrAB1
Name
(GenBank) carbamoyl-phosphate synthase,pyrimidine-specific, large chain
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
cdc
Clostridioides difficile CD196
Pathway
cdc00220
Arginine biosynthesis
cdc00240
Pyrimidine metabolism
cdc00250
Alanine, aspartate and glutamate metabolism
cdc01100
Metabolic pathways
cdc01110
Biosynthesis of secondary metabolites
cdc01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
cdc00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
CD196_3380 (pyrAB1)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
CD196_3380 (pyrAB1)
00220 Arginine biosynthesis
CD196_3380 (pyrAB1)
Enzymes [BR:
cdc01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
CD196_3380 (pyrAB1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
MGS
Dala_Dala_lig_C
ATPgrasp_Ter
ATP-grasp_3
ATP-grasp
GARS_A
ATP-grasp_4
RimK
DUF4874
Motif
Other DBs
NCBI-ProteinID:
CBA66826
UniProt:
A0A0H3N718
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All DBs
Position
complement(3986543..3989749)
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AA seq
1068 aa
AA seq
DB search
MPKLDSIKKTLVLGSGPIIIGQAAEFDYSGTQACQALKEEGIEVVLVNSNPATIMTDKEI
ADKIYIEPLTIEFIEKIIEKERPDSLLAGMGGQTGLNLAVELHDAGILDKYNVKVIGTSI
ESIKKGEDRDLFREVMKEINQPVIVSDIVTNLEAGLEFANKIGYPVVVRPAYTLGGTGGG
IADTEEELREILSHGLQLSPVGQVLLEKSIKGWKEIEYEVMRDGNGNCITVCNMENVDPV
GVHTGDSIVVAPSQTLSDEEYQLLRKASIDIINAIEVQGGCNVQIALNPHSLEYAIIEIN
PRVSRSSALASKATGYPIAKVAAKIALGYTLDEIENAVTKKTYACFEPTLDYVVVKIPKW
PFDKFRHANRKLGTKMMATGEIMSIGSNFEAAILKGIRSLETGKYSLVHAPSEGRTLEEL
KARVVVPDDERLFDLAEMIRRGYKVEMISEITGVDKWFINKFKWIVEQEEKLKVLKIEDL
DKEYLHELKKKGFSDKGISDLMKISPEKLYELRSLYNIQPVYKMVDTCGGEFEALSPYYY
STYEQYDEVVVSDKRKVVVLGSGPIRIGQGIEFDYCSVHCVKSLRKMGIETIIVNNNPET
VSTDFDTSDKLYFEPLTEEEVLNIIEKEKPEGVILQFGGQTAIKLAKFLHEKNIPILGTD
FRDIDAAEDREKFDDLLERLDINRPKGKGVWTTNEGVEIAKELGYPVLVRPSYVLGGQGM
EITYNEEKLIQYLDDAFDRDHKNPVLIDKYLTGREIEVDAICDKEDILIPGIMEHLERAG
VHSGDSTTMYPSQNISDEIKEKIVEYTKKIALDLNVLGMVNIQFIEFQNELYIIEVNPRA
SRTVPYISKVSGVPIVDLATKCMLGAKLKDLGYGTGVYKEPKLVSVKVPVFSMSKLSKVE
VSLGPEMKSTGEVLGVGENLEEALYKGFLAAGRHMSDERGVVLATVNNHDKDEFIEIAKD
MKELGYTFVATEGTAKSLRENGIEADIVNRIEEPRPNILDAIRNKQVDIVINTPTKGNDS
TRDGFKMRRTAIEFSTEIMTSLDTLKALVEVKKKHLNKDKLKVYNIAE
NT seq
3207 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaattagatagtataaagaaaactttagtattagggtcagggccaataataata
ggtcaagctgcagagtttgactattcaggaacacaggcctgccaagcattaaaagaagag
ggaattgaagttgtattagtaaatagtaacccagctactataatgactgataaagaaatt
gcagataaaatatatatagaaccattaacaatagaatttatagaaaaaataatagaaaaa
gaaagaccagacagtttacttgcaggtatgggtggtcagacaggattaaacttagctgta
gaattacatgatgctggtatattagataaatataatgtaaaagttataggaacatctata
gaatctataaaaaagggcgaagatagagatttatttagagaagtaatgaaagaaataaat
caaccagtaatagttagtgatatagttacaaatttagaagcaggtcttgagtttgccaat
aagataggatatccagtagttgtaagaccagcatatacgctaggtggaactggtggaggt
atagctgatactgaggaagaattaagagaaatactttcacatggactacagctaagtcct
gttggacaagttcttcttgaaaagagtataaaaggttggaaagaaatagaatatgaagta
atgagagatggaaatggaaactgtataactgtatgtaatatggaaaatgtagacccagtt
ggagttcatacaggagacagtatagttgttgctccaagtcaaactctaagtgatgaagag
tatcaactacttagaaaggcatcaatagacataataaatgcaatagaggttcaaggtgga
tgtaacgttcaaatagctttaaacccacatagtttagaatatgcgataatagaaataaac
ccaagagttagtaggtcatcagccctagcatcaaaagctacaggatacccaatagcaaaa
gtagcagctaagatagctttaggttatactttggatgagatagaaaatgcagtaactaaa
aaaacttatgcttgttttgagccaacattagattatgtggtagtaaaaataccaaagtgg
ccatttgataaatttagacatgcaaatagaaaattaggaactaagatgatggcaactggt
gaaatcatgagtataggaagtaactttgaggctgctattcttaaagggataagatcactt
gaaacaggaaaatattcattggttcatgctccatcagaaggtagaacattagaagaatta
aaggctagagtagtagtacctgatgatgagagactatttgacttagctgaaatgataaga
agaggctataaagtagaaatgatatcagaaataactggtgttgataagtggtttataaat
aaatttaaatggatagtagaacaagaagaaaagttaaaagttctaaaaatagaagactta
gataaagaatatttacatgaattaaagaaaaagggattttctgataaaggtatatctgac
ttaatgaagataagcccagaaaaattatatgaattgagaagtttatataatatacaacca
gtttataaaatggttgatacatgtggaggagaatttgaagctctatcaccttattactat
tcaacttatgaacaatatgatgaggtagtagttagtgataagagaaaagttgtagtattg
ggttctggtccaataagaataggtcaaggtatagaatttgactattgttcagttcactgt
gtaaaatctttaagaaaaatgggaatagaaactataattgtaaacaataaccctgaaact
gtaagtacggattttgatacatctgataagttgtattttgaaccattaacagaagaagaa
gttttaaatataatagaaaaagaaaaaccagaaggtgtaatactacagtttggtggacaa
acagctataaaattggctaagtttttacatgaaaaaaatatacctatactgggaacagac
tttagagatatagatgcagcagaagatagagaaaaatttgatgatttactagagagacta
gatataaatagaccaaaaggaaaaggtgtatggacaactaatgaaggtgttgaaattgct
aaggagttaggttatccagtattagttagaccatcttatgtacttggtggtcaaggtatg
gaaataacttataacgaagaaaaactaattcagtatttggatgatgcatttgatagagac
cataaaaatccagtacttatagataaatatctaactggtagagaaatagaagtagatgct
atatgtgataaggaagatatattgatacctggtataatggaacatttagaaagagctgga
gttcactctggagatagtacaacaatgtatccaagtcaaaatatatctgatgaaataaaa
gaaaagatagtagaatacactaaaaaaatagctttagaccttaatgtgcttggtatggtt
aatatacaatttatagaatttcaaaatgaattatatataattgaggttaaccctagagct
agtagaacagttccatatataagtaaagtaagtggagtaccaatagttgacttggctact
aagtgtatgttaggagctaaattaaaggatttaggatatggtacaggagtttacaaagag
ccaaaattagtatcagtaaaagtaccagtattctcaatgtctaaattatctaaagttgaa
gtaagtctaggacctgaaatgaagtctacaggagaagtcctaggtgtaggagaaaattta
gaagaagccttatataaagggttcttggcagcaggtagacatatgtctgatgaaagagga
gtagtacttgctactgtaaataatcatgataaagatgagtttatagagatagcaaaagat
atgaaagaattaggatatacttttgttgctacagaaggaacagcgaagagtttaagagaa
aatggaatagaggctgatatagtaaatcgaattgaagagcctagaccaaacatattagat
gctataagaaataaacaagttgatatagtaataaatacaccaactaaaggaaatgactct
acaagagatggatttaagatgagaagaacagccattgaattttctactgaaataatgaca
tctttggatacgctaaaagctttagtagaagttaagaagaaacatttaaacaaagataaa
ttaaaagtttataatatagctgagtaa
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