Clostridioides difficile CD196: CD196_3455
Help
Entry
CD196_3455 CDS
T00997
Name
(GenBank) putative selenocysteine synthase
KO
K01042
L-seryl-tRNA(Ser) seleniumtransferase [EC:
2.9.1.1
]
Organism
cdc
Clostridioides difficile CD196
Pathway
cdc00450
Selenocompound metabolism
cdc00970
Aminoacyl-tRNA biosynthesis
cdc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cdc00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
CD196_3455
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CD196_3455
Enzymes [BR:
cdc01000
]
2. Transferases
2.9 Transferring selenium-containing groups
2.9.1 Selenotransferases
2.9.1.1 L-seryl-tRNASec selenium transferase
CD196_3455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SelA
Cys_Met_Meta_PP
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
CBA66969
UniProt:
A0A0H3N8L6
LinkDB
All DBs
Position
complement(4071472..4072581)
Genome browser
AA seq
369 aa
AA seq
DB search
MSSIFEKYSVRRVINASGKMTILGVSTVDKEVIEAIGEGCKNFLIIEELVNKTGEYIANL
LGCESALIVSSASAGIAQSVGAMIAKDDMSLVYNVNNPKKQVKREIIIPKGHNVDYGVPV
EVMIRLGGGEVVEAGYANMCNKEHIIREINENTAAIMYIKSHHCVQKSMLSVLDAVQVAK
EYNLPLIVDAAAEEDLNVYYELGADLVIYSGAKAIEGPSSGLVIGKKKYIDNVKLQSKGI
GRAMKIGKENIVGLTCAIERYISNDKVTLKEMEDKLNPFIDKINTIKGVSASITRDSAGR
EILRGEINFNEDIINKSTQQIINELRSGEIAIYTRDYKANEGKIEIDIRSVTGSDLDNIY
NRIKNIVES
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtatatttgaaaaatactctgtaagacgtgttataaatgcttcaggcaaaatg
actatactaggagtatcaacagtagataaggaagttattgaagcaataggtgaagggtgt
aaaaatttccttataatagaagaacttgtaaataaaacaggtgaatatatagcaaattta
ttagggtgtgaaagtgcactaatagtttctagtgcatctgctgggattgcacagagtgtg
ggagcaatgatagcaaaagatgatatgagtctagtttacaatgtaaataatcctaagaaa
caagttaaaagggaaataataattccaaaggggcataatgttgattatggagttccagta
gaagtaatgataagacttggaggaggagaagttgttgaggccggctatgctaatatgtgt
aacaaggaacatataataagagagataaatgaaaatacagcagcaattatgtatattaaa
tctcatcattgtgttcaaaagagtatgctaagtgtattagatgcagtacaagttgctaaa
gaatataatttacctttgatagtagatgcagcagcagaagaagatttaaatgtatattat
gaattgggagcagacctagtgatatacagtggtgctaaggctatagaaggtcctagctcg
gggttagtaataggtaagaaaaaatacatagataatgtaaagcttcaatcaaagggtata
ggaagagctatgaaaataggaaaagaaaatattgtaggtctaacatgtgcaattgagaga
tatataagtaatgataaagtaactttaaaagaaatggaggacaagctaaatccatttata
gacaagataaatactataaagggagtgagtgctagtataactagagattcagcaggtaga
gaaatacttcgtggagaaattaactttaatgaagatataataaataagtcaacacaacaa
attataaatgaacttagaagtggagagatagctatatacactagagactataaggctaat
gaaggcaagattgagattgatataagaagtgtaactggaagtgatttagataatatttat
aataggataaaaaatatagtagaaagttag
DBGET
integrated database retrieval system
