Corynebacterium diphtheriae CDCE 8392: CDCE8392_0194
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Entry
CDCE8392_0194 CDS
T01700
Symbol
spaF
Name
(GenBank) surface-anchored protein fimbrial subunit
Organism
cdd
Corynebacterium diphtheriae CDCE 8392
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpaA
Trypan_PARP
Glyco_hydro2_C5
GH101_N
Motif
Other DBs
NCBI-ProteinID:
AEX71196
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Position
187533..190634
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AA seq
1033 aa
AA seq
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MKTKFMSVAAALTAALALVFGVAAPGVLPSLPVATAQAQETTIPVTPLKHGFSNLKANPD
PTFEFTVGADATVTSLEFSVSGKSWVQGYKLEINGMEIAPKFTRSDDPRQNFTITHDGLN
ISVRKEDVVRLTPDFTAPKVTGSVSVALKGTTSTTTGPDPEPEPQPDPTEPQPSPEPEPG
TSVTPAAPTAVDPATAPSCVEKGFINIPDTTGVDYFIGGERKSAGQHFYEDQKATVKVTA
KSQNGYQIAAGARTEWSFDFSGQVKNCSDSSEDPKPQAVEGRHFDAIGHEFAIKADPVDP
KKPNAFTAKATAVSHMKYATVRIETDATFLDLQKYNLTLDKIESGVTLQKRNVNIGNGFI
TMEVVPVKDDKPVDSAVVPKDAVFTFTNNLPQNKNLKVTLDVYGEKKGEPKPPDIISPPD
GADWVHGRVPNPPMPKRCGLRIAVVADLSTSLKYADSNGFDESKKAANALIDSLAGTPAE
LGIYNFAGEAPRIQSGSTHDQNPPYISLQSDDGVSRAKSIVSNWNGSGSTNWEAGLKQVA
AGNYDVVYFITDGMPTTSSTIKSKGIGGEFVQASALNDAIKAANELKAAGTRVVPIMVDL
TVGGMRAQRTTVTQDLVLKDVRFKKRSETITEPGLYWEFTRKYVDEASYVNTDTTANFEI
AHKGGFIKVWERYSQRKQKDITKDQSKWTYGPRGVKTMGEDISGTGDTIRVEQYSKLAAQ
MKKIGEELASRCNGVVKVKKRIVDENGNVLEDGAPGWEFTLSAGGQDIIDPGNGDRVRKS
LKTTSSANEDRGTASWNIMSEQEQELTLVETQQLGFNLYKRNDKNAECTETRDGKTESIE
VTNDGEFGFKVKMSEKDKKLSSVFCVVDNYKQPETPPGKLTFKKAQYDGDKIVELPGLGG
ATFEIYRSKEGQPDYSAGALYTINDEQLSIEVKTTGTFFLVETKAPKGLNLLAQPVKFEI
SVDEKTKKYKISAGSTSSGQIQVSGDGDKMILTVADTTAGELPKTGGYGVGLLGLIGAVL
AGAGLLLGRRKTA
NT seq
3102 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacaaagttcatgagtgtagcggccgcgctgaccgccgcgcttgcgctggttttc
ggcgtcgctgccccaggcgtgctgcccagccttccggtggcgacggcgcaggcgcaggag
acgaccattccggtgaccccgttgaaacacggtttttcgaacctcaaagccaatcccgat
ccgacatttgagttcaccgttggggcagacgccacggtcacgagtcttgagttttccgtg
tccggaaagagttgggtgcaggggtacaagctagagattaacggaatggagattgctcca
aagttcacgcgaagcgatgacccacgtcaaaactttacgatcacccatgacggtctgaat
atttcggtgagaaaggaggacgttgttcgcctgactcccgatttcacagcgccaaaggta
acgggttcggtgtccgtcgcactgaagggcacaacatcaacaaccaccggccctgacccg
gaaccggagccacagcctgacccaacggagccacagccatccccggaaccggagccgggt
acgtccgtgactcccgcagcgccaactgcagttgatccagccaccgcgccctcttgtgta
gagaagggctttatcaacatcccagacacgacaggtgtcgactacttcattggtggcgag
cgaaagtccgctgggcagcacttctacgaggaccaaaaggccaccgttaaggtcacggcg
aagtcgcagaacggataccagatcgctgccggtgcgaggaccgagtggtctttcgacttc
agcgggcaggtgaaaaactgttcagattcttctgaagaccccaagccacaggctgtcgaa
gggcgtcactttgatgccatcggccacgagtttgcaattaaagctgacccagtagatccg
aagaagcccaatgcctttacggctaaggcgactgcggtatctcacatgaagtacgcaacc
gtgcgtatcgagactgacgcgaccttcttggacctgcagaagtacaacctcactctggac
aagatcgagtcaggcgtgaccttgcagaaacgcaacgtcaatattggcaacggctttatc
accatggaagttgttccggtaaaggatgataagccggttgactctgccgttgtaccgaag
gatgcggtattcaccttcactaataatctcccgcagaacaagaatttgaaagtcaccctt
gatgtgtatggagagaaaaaaggtgagccaaaaccaccggatattatttcgccaccagat
ggagctgattgggtgcatgggcgagtccctaacccgccgatgccaaagcgttgtggtctg
cgcattgctgtagtggccgacctttcaacttcgctgaaatacgctgattcaaatggcttc
gacgagtcgaaaaaagcagcaaatgcgttgattgattcgctggctggaactcctgcggag
ctcggcatctacaattttgctggtgaagcgccacggatccaaagcgggtctacgcatgat
cagaatcctccttatatctcgttgcagtctgatgatggggttagtagagcaaagagcatt
gtctctaactggaacggcagcggttctactaactgggaagctggtcttaagcaagtcgct
gcaggaaactatgacgtggtgtacttcatcactgacggtatgcccacgacctcctcgaca
atcaagagcaagggcatcggtggcgagttcgttcaggccagtgctctcaacgacgcgatc
aaggccgccaacgaactcaaagctgccggtacccgtgttgttccgattatggtcgacctg
accgtgggtggaatgcgtgctcagcgcacaactgttactcaagatctcgtattgaaagat
gtgcgtttcaagaagcgtagcgaaaccattacggagcccgggctttattgggagttcacg
agaaaatacgtggatgaggcaagctacgtgaacactgacactaccgcgaactttgagatt
gcgcataagggtggttttatcaaggtttgggagcgatactcacaaaggaagcaaaaagat
attacgaaggatcaatccaagtggacctacggtccgcgaggggtcaagaccatgggtgag
gatatttctggtaccggcgacaccatccgagttgagcagtactcaaagctcgccgcgcag
atgaagaagatcggtgaagaacttgcttctcgttgtaacggtgtagtgaaggtcaagaag
aggattgtcgatgaaaacggcaatgttctcgaagacggtgccccaggttgggaattcacc
ctttctgccggtggccaggacatcatcgacccaggtaacggcgatcgcgttcggaagtcg
ctgaaaacaacgtcttcggccaacgaggaccgtggtaccgcttcctggaacatcatgagc
gaacaagaacaggaactgactctggtagagacacagcagctgggtttcaacctctataag
aggaacgacaagaatgctgagtgtaccgaaacccgtgacgggaaaacggaatctattgag
gtcacaaatgacggtgagtttggtttcaaggtcaagatgagcgagaaagataagaaactt
tcttcggttttctgcgtagttgataactacaagcagccggaaactccgccgggcaagctg
accttcaagaaggctcagtacgacggcgataagatcgtcgagctgcctgggctgggtggc
gcgaccttcgagatctatcggtccaaggaaggccaaccggactacagcgctggagcgctc
tacaccatcaatgacgagcagctgtctatcgaagtgaagacgaccggtacgttcttcctc
gttgaaacgaaggcgcctaaggggctcaacctgctggcccagccggtcaagttcgagatt
tcagtggatgagaagactaagaaatataagatttctgcgggcagcaccagcagcggacaa
atccaagtgagtggcgatggcgataagatgatcctgacggttgcggacaccactgccggt
gagctcccgaagaccggcgggtacggtgtgggcctcttggggctcattggtgccgtgctc
gcaggcgcggggctcctgctcggccgccgcaagaccgcctaa
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