Corynebacterium diphtheriae CDCE 8392: CDCE8392_1048
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Entry
CDCE8392_1048 CDS
T01700
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
cdd
Corynebacterium diphtheriae CDCE 8392
Pathway
cdd03030
DNA replication
cdd03410
Base excision repair
cdd03420
Nucleotide excision repair
cdd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cdd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CDCE8392_1048 (polA)
03410 Base excision repair
CDCE8392_1048 (polA)
03420 Nucleotide excision repair
CDCE8392_1048 (polA)
03440 Homologous recombination
CDCE8392_1048 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cdd03032
]
CDCE8392_1048 (polA)
03400 DNA repair and recombination proteins [BR:
cdd03400
]
CDCE8392_1048 (polA)
Enzymes [BR:
cdd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CDCE8392_1048 (polA)
DNA replication proteins [BR:
cdd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CDCE8392_1048 (polA)
DNA repair and recombination proteins [BR:
cdd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
CDCE8392_1048 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CDCE8392_1048 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
HHH_5
DNA_pol_lambd_f
DUF2275
DUF4880
Motif
Other DBs
NCBI-ProteinID:
AEX72041
LinkDB
All DBs
Position
1082019..1084718
Genome browser
AA seq
899 aa
AA seq
DB search
MLDVLVTLAIVTSNANRLMLIDGHSMAFRAFYALPAENFSTSGGQATNAVYGFLSMLSSL
LVEEKPTHVAVAFDVGRQTFRTEMFPEYKAQREAAPPEFKGQVEIIKEVLETLGITTLEK
ENFEADDIIATLATAAGPLGFDTYIVTGDRDSFQLVNESTTVLYPMRGVSVLHRFTPEAV
EEKYGLTPVQYPDFAALRGDPSDNLPNIPGVGEKTATKWIVQYGNLDSLLAHADEIKGKA
GNSFRERLDQVRMNRTLTEMVKDLELPYAPDQLERKPADASAIASKFDELEFGSNLRDRV
IHAVDAQGNVSEEPEEDKPEVVIDHEKLASWLATRAGQSLALYVRGHGSPASGDAESAAI
VDKQSHAVALDFGDLDADDDQAFAQWIASDSPKYLHEAKAVFHMLAGRGYTLNGIEHDTA
IAGYLLRPGQRTYDLKDVYQRHLQRQLGGGSSESGQRSLLDAPNAQELVDSAVAILELSK
SLTAQLQAIDAYELYREMELPLVGVLARMEATGICVDVATLREQRDIFVEQVKEEESAAR
ELAGDETLNLSSPKQLQVVLFDTLGLPKTKKTKTGYSTAAKEIESLAVKNPHPFLDHLLA
HREFQKMKTTLDGLIKAVGDDGRIHTTFNQTVASTGRLSSTEPNLQNIPVRTPAGRKIRS
AFVVGQGYKSLLTADYSQIEMRVMAHLSEDPGLIEAYQTGEDLHNFVGSKVFDVPVDQVT
PELRRRVKAMSYGLVYGLSAFGLSQQLNIPAGEAKVIMESYFERFGGVKRYLDQVVEQAR
KDGFTSTLFGRRRYLPELSSDNRVARENAERAALNAPIQGTAADIIKIAMLRVDARLTAE
NCQSRVLLQVHDELVLEVASGEQEKVQQLVEEEMDAAISLRVPLEVSAGVGTNWEEAAH
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
atgttagatgtactcgttacactggccatcgtgacttccaatgcgaaccgactcatgctt
atcgacggccactcgatggccttccgtgcgttctacgcgctgcctgcggagaacttctct
acatcgggtggacaggcgacgaatgccgtttacggatttttgtcgatgttgtcgtctctg
ctcgttgaagaaaagccaacccacgtagcagttgcgttcgacgttggccgccaaacattt
cgaaccgagatgttccctgaatacaaagcgcagcgtgaggctgcgccaccagaattcaag
ggacaggtggaaattattaaagaggtcctagagactttgggaatcaccaccttggaaaaa
gaaaattttgaggcggacgatatcatcgccacgttggctaccgcagcgggcccacttggt
tttgatacgtatatcgttactggtgatcgcgattctttccagctagtaaacgaatcaacc
acggtgctgtatcccatgcgtggtgtatctgttcttcatcgtttcaccccagaagcggtg
gaagaaaaatatggattaactccagtacagtatccagatttcgcggcattgcggggagat
ccttcagataatttgcctaatatcccaggtgttggtgagaaaaccgctacaaagtggatc
gtccaatatggaaatctggattccttgcttgctcatgccgatgagattaagggcaaagct
ggtaatagcttccgagagcgtttagatcaggtgcgtatgaatcgcactttgactgagatg
gtcaaggacctcgaacttccttatgctccagatcagctcgagcgcaaacctgctgatgcc
tcggcaattgcatctaagtttgatgaacttgaatttggatcgaatctccgtgatcgagta
atccatgcagttgatgcgcaagggaacgtctctgaagagcctgaagaagacaagcctgaa
gtcgtcatcgaccatgaaaaactagcatcatggcttgccactcgtgctgggcagtcgctg
gcattgtatgtgcgaggccatggtagtcccgccagtggtgatgctgagtcggcggcgatc
gtcgataagcaatctcatgctgtagcgcttgatttcggtgaccttgacgccgatgacgac
caagcatttgcgcagtggattgctagtgattcgcctaaatacctacatgaagctaaagct
gtatttcatatgctcgcaggcaggggctacactctcaacggcatcgagcatgataccgca
attgcggggtacttattgcgccctggccagcgcacgtatgatctgaaagacgtgtatcag
cgccatttgcaacgtcaactaggcggcggttctagcgagagcggtcaacgctcgttgctt
gacgcacctaatgctcaagaacttgttgacagtgctgtagcgattttggagttaagtaaa
tcgcttactgcgcaactacaagctatcgacgcatatgagctctatcgggaaatggagctt
ccgctcgttggcgtgttggcgcgcatggaggcaactggaatttgcgttgatgtggccaca
ttgcgggaacagcgagacatatttgttgagcaggttaaagaagaagaaagcgctgcccgg
gaactcgcgggggatgagactctaaatctgtcgagcccaaagcagcttcaagtagtttta
tttgacactttagggcttcctaagactaagaagaccaagactggatactccacggcagca
aaagaaatagaatcgctggctgttaaaaatccacatccgttccttgatcatctcttggcg
catcgagagttccaaaagatgaaaaccactctagacggcctcattaaagcagtcggagat
gacggtcgtattcacactacgtttaatcaaactgtcgcctcaactggtcgtttgagttca
acggaaccaaacctgcaaaacattcctgtgcgtactccagcaggaaggaaaattcgctct
gcttttgtggtaggacaagggtataagtctctgctgacggcagactattcgcagattgag
atgcgtgtgatggcgcatctttctgaggatccaggtttgattgaggcttatcaaacgggt
gaggacctccacaattttgtgggttcgaaggtcttcgatgtgccagttgatcaagtaact
cctgaactacgtcgccgagttaaagcgatgagctatgggttggtctatgggctttctgca
tttggtctttcccaacaattaaacatccctgctggtgaagccaaagtgatcatggaaagc
tacttcgaacgattcggaggggtaaaacgatatcttgaccaagtggtcgaacaagcccga
aaggatgggttcacatcgactttgtttggccgtcgacgttacttgccggagctttcttcg
gataatcgagtggcacgtgaaaatgccgaacgagctgcattgaatgctccaattcaaggc
acagcagcagacattattaagattgcaatgctgcgtgtcgacgcccgccttactgcagaa
aactgccaatcgagggtgcttcttcaagtccacgacgaattggtgctcgaggtagcttca
ggtgaacaagaaaaggttcaacaacttgtagaagaagaaatggacgccgctatttcactg
cgcgtaccgctggaggtttctgcaggtgtcggtacaaactgggaagaagctgcgcattaa
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