Corynebacterium diphtheriae CDCE 8392: CDCE8392_1360
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Entry
CDCE8392_1360 CDS
T01700
Symbol
dapF
Name
(GenBank) Diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
cdd
Corynebacterium diphtheriae CDCE 8392
Pathway
cdd00300
Lysine biosynthesis
cdd00470
D-Amino acid metabolism
cdd01100
Metabolic pathways
cdd01110
Biosynthesis of secondary metabolites
cdd01120
Microbial metabolism in diverse environments
cdd01230
Biosynthesis of amino acids
Module
cdd_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
cdd00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
CDCE8392_1360 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CDCE8392_1360 (dapF)
Enzymes [BR:
cdd01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
CDCE8392_1360 (dapF)
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
CntK_N
YbbR
fn3_5
Motif
Other DBs
NCBI-ProteinID:
AEX72348
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Position
complement(1427951..1428895)
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AA seq
314 aa
AA seq
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MDRCERRYFLYGVIIAVMTYMNTHDAQLPVYKGHGTENDFVIIPDLDAKIELTPDFIAAL
CDRRSGIGGDGLLRVATAQALLKSGVLAALPDGVAATDVFMDYYNADGSTAQMCGNGTRV
FAHWVRAHGIKDQDEFVVGTRAGARFVKVRSFDDSQAEVTVDMGSAEVTGVSTCTIGAQQ
FAGLGVDMGNPHLACVVPGYGQEDIENLDLVKPLFDPKFFPEGVNVEIATPLVQGVTHMR
VFERGVGETRSCGTGTVATARAALADAGHADGEVVVVVPGGKVRVTIQGDESTLTGPSRI
VASGYINLAGLKKN
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
ttggatcgatgcgagcggagatactttctctatggcgttatcattgctgtcatgacctac
atgaatactcacgatgcacagttgcccgtctataaagggcacggcacggaaaatgatttc
gttatcatcccggacttagatgcgaaaattgagctcacaccagatttcattgccgcacta
tgtgatcgccgaagcggaattggtggcgatggacttctccgcgtagcaacagctcaagcg
cttctgaaatcaggagttctcgctgcccttccagacggagtagctgcgactgacgtgttt
atggactattacaatgcagatggatcaactgctcaaatgtgtggcaatggaacgcgagtt
tttgcccattgggtacgagctcatggaattaaagaccaagacgagtttgttgtaggtacc
cgcgccggggcacgttttgtcaaagtacgtagctttgatgattcacaggctgaagttacg
gttgatatgggctcagcggaagtcacaggtgtatctacatgcacaatcggggcacaacaa
ttcgctggcttaggcgttgatatgggtaacccacatttggcatgtgttgttcctgggtat
ggtcaagaagacattgaaaatcttgatttagtcaaaccgttatttgacccgaagtttttc
ccagaaggtgtaaatgttgaaatcgctacgcccttagttcaaggtgttacacatatgcgt
gtctttgaacgaggggttggagaaacgcgaagttgcggaactggcactgtggctacggct
cgggcggcattagctgatgctggacatgccgatggggaagtggttgtagtcgttccaggc
ggaaaagtcagggtgactattcagggggatgaatcaactttgactggcccgtcacgaatc
gtcgcctcggggtatatcaatctggccggactgaagaaaaactaa
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