Corynebacterium diphtheriae CDCE 8392: CDCE8392_2090
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Entry
CDCE8392_2090 CDS
T01700
Symbol
pks13
Name
(GenBank) polyketide synthase involved in mycolic acid biosynthesis
KO
K12437
polyketide synthase 13
Organism
cdd
Corynebacterium diphtheriae CDCE 8392
Pathway
cdd00074
Mycolic acid biosynthesis
cdd01100
Metabolic pathways
cdd01110
Biosynthesis of secondary metabolites
Module
cdd_M00887
Mycolic acid biosynthesis, meromycolic acid + alpha-carboxyacyl-CoA + trehalose => TMM => TDM/mAGP/GMM
Brite
KEGG Orthology (KO) [BR:
cdd00001
]
09100 Metabolism
09103 Lipid metabolism
00074 Mycolic acid biosynthesis
CDCE8392_2090 (pks13)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
cdd01004
]
CDCE8392_2090 (pks13)
Lipid biosynthesis proteins [BR:
cdd01004
]
Polyketide synthase
Modular PKS
CDCE8392_2090 (pks13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ketoacyl-synt
Acyl_transf_1
Ketoacyl-synt_C
PP-binding
Thioesterase
KAsynt_C_assoc
DUF7080
Thiolase_N
Abhydrolase_6
Abhydrolase_1
Abhydrolase_3
CurL-like_PKS_C
Motif
Other DBs
NCBI-ProteinID:
AEX73073
LinkDB
All DBs
Position
complement(2231533..2236293)
Genome browser
AA seq
1586 aa
AA seq
DB search
MDSRVTAMTTSQLRTWLRDWVLATTGLPAEEITDDKPMQSFGLSSRDVVLLSGELENLLG
VKLDATIAYEYPTIAALSQRLIEGAPEAATPVFTQRETQRTASHDIAIVGMAARYPGAHD
IDQMWSMLIEGRDGITDLPEGRWSEYAADEVTSENIANTDLRGGYLDDIAFFDAEFFGLS
PLEAVNIDPQQRIMLELTWEALEHAHIPASSLKGKPVGVFFGSSNNDYGMLIGADPAESH
PYAMTGNASSIVANRVSYAFDFRGPSVSVDTACSSSLVSVHQAVRALREGDADVAVSGGV
NIMAAPFVSTSFGELGVFSPTGKIHAFSDDADGFVRSDGAGVLVLKRVEDAVADGDTILA
VIKGSAVNSDGHSNGLTAPNPDAQVDVLQRAYADAGIDPRYVDYVEAHGTGTILGDPIEA
TALGKVLGPGRDAATPTLLGSAKTNFGHSESAAGAAGLIKVVLSMMNNTLPASLNFAGPN
RYVDFDAEHLEVVEDPREWPEYSGKKIAGVSGFGFGGTNAHVVLSSYEPAADAERRHAPS
LIDPDNPNAVTLEVSGLLPSRRREAAAALADFLEGRPDSDLPKVARSTAKRNHGRSRAVV
TAETTEEAVKRLRTVAEGKTAMGIAVADAPSNAPVFVYSGFGSQHRLMAKKLLGVSEEFA
QRIAELDELVVFEAGWSMLDIITNDEETYTTETAQVTITAIQIALTDLLASFGATPAGVV
GMSMGEIAAAYAAGGLSDRDAMTIAIHRARLMGEGEKSLPEDQLGAMAVVEFSVEALEEF
RQQNPEFSGVEPAVYAAPGMTTVGGPREAVIKLVEKLEAEGKFARLLNVKGAGHTSALDP
LLGELAAETSMIEPKPLRIPLYSSVDRATVYPVGSVVHTTDYWLRCTRQSVWFQDATEQA
FAHGAMMLVEISPNPVALMPMMNTAFSVGKSDAQLLFALKRKVDEVASIRDLLAKIYVTG
APISFDYGDGEIIPAPHIPWKRQHYWTSARPSSGNRVAMPGTKVTLPGGALAFTMVADQV
PSTAALIDATVTSVQPGAQVLAISETATLPATGELTTVATPNVGGVAVVVYRVIDGQTQQ
IAEAFATTLSAPHTSAAEAAPDSVVGTVVEVEAPEVPDNLLWDPATETVEERLRAIVSEA
MGYDVEDLPRELPLIDLGLDSLMGMRIKNRVEHDFQIPPLQVQTLRDASVADVVALLEEL
VADRGAAQPVETEIAIEHTATAAESHEVGVAPRDASERLVFATWAGITGAAAAGVTSTLP
EITEEQAREIAERLTERAGVAMSAEQVQQAETLEPLANIVREGLETDVEGNIRVLRARPE
GSTQPAVFMFHPAGGSSVVYQPLMRRLPADVPVYGVERREGSLEERAAAYLDEIKQYSDG
LPIILGGWSFGGALAYEVAYQLQDSDVEIATIALLDTVQPAHLAPDTKEETVKRWERYSA
FAKKTYGLDFPVPYELLETAGEDALLAMMAEFLSTTDATEHGLSAGVLEHQRASFVDNRI
LDRMDMQRWASVKIPVMLFRAERMHDGAIELEPAYAEIEPDGGWSAIVEDLVIIQLSGDH
LAVVDEPEIGKVGVALTNRIEQLQGK
NT seq
4761 nt
NT seq
+upstream
nt +downstream
nt
atggattctcgcgtcacggctatgaccacttcgcagctacgcacatggctgcgagattgg
gtcctagccactacaggtttgcccgcggaagaaatcaccgatgataaaccgatgcaatct
tttgggctttcctcccgtgacgtggtgctactttccggggaattagaaaacctcttgggc
gtcaaactcgacgcgaccatcgcttatgagtacccgacgatcgcggcgctgagccagcgt
ctgatcgagggtgctcccgaggcggccacccctgtctttacacagcgggaaactcagcgc
accgcgtcccatgacatcgctatcgtgggtatggctgcccgttaccctggcgcacatgac
atcgatcaaatgtggtcgatgctcattgagggccgcgacggtatcaccgacctgccggag
ggccgttggtcggaatatgctgctgacgaggtcaccagcgaaaacatagctaataccgat
ttacggggcggctacttagacgacattgctttctttgatgcagagttctttggactatct
ccgctggaagcagtcaatatcgatccgcagcagcgcatcatgttggagctgacatgggag
gctcttgagcacgcgcacattccggcatcctcgcttaagggcaagccggtgggtgtgttc
ttcggttcttccaataacgactacggtatgttgatcggtgctgatccagccgagtcgcac
ccctatgcgatgacgggtaatgccagctcgattgtggctaaccgtgtgtcctatgccttc
gacttccgtggcccgtcggtaagcgtggatacggcgtgctcctcgtcgctggtatcggtc
caccaagcggtgcgtgcactgcgtgagggcgacgctgatgttgctgtctccggtggcgtg
aacatcatggcggcaccattcgtgtccaccagctttggcgaacttggcgtgtttagccca
acgggcaagatccacgcgttttccgacgacgccgatggcttcgtgcgttccgacggcgcc
ggcgtgctcgtgctcaagcgcgttgaggacgcggtcgccgatggcgataccatccttgct
gtgatcaagggctccgcggtgaactccgacggacactccaacggtctgaccgcccctaat
ccagacgcacaggtcgatgtgctgcaacgcgcttacgccgacgctggtattgacccacgc
tacgtggactacgtggaagcacacggtaccggcaccatcttgggtgaccccatcgaagca
accgcactcggtaaggtcctaggccctggccgtgacgcagcaacccctactttgctgggt
tctgctaagaccaactttggtcactccgaatcggctgctggcgctgcgggcctgatcaag
gtcgtgttgtcgatgatgaacaacacgctgccagcgtccctgaatttcgctggtccgaac
cgctacgtcgattttgatgccgagcacctcgaggtcgtggaagatccacgcgaatggcct
gagtattccggcaagaagatcgccggtgtgtccggattcggttttggcggcaccaatgcg
cacgttgtgctgagctcgtatgagccggcggctgatgcggagcgtcgtcacgctccgagc
ctgatcgacccagacaacccgaatgctgtcacccttgaggtgtcgggattgctgccgtcg
cgacgtcgtgaggcagccgccgcgctggccgacttcctcgaaggtcgccccgacagcgac
ctgcccaaggtggcgcgctcgaccgcaaagcgcaaccatggccgctcccgcgctgtggtc
acagcagaaaccactgaagaggccgtcaaacgcctgcgtaccgttgctgaaggcaagacc
gccatgggtatcgcagttgccgacgcccccagcaacgcacccgtgtttgtttactccggc
tttggctctcagcaccgcttgatggccaagaagctgctgggcgtttccgaggagttcgcg
cagcgtatcgcggagctcgacgagctggtggtttttgaggccggctggtccatgctggac
atcatcaccaacgatgaggaaacctacaccaccgaaaccgcgcaggtcaccatcactgcc
atccagattgcactgacagatctgctggcttcctttggtgccaccccagcgggtgttgtg
ggcatgtcgatgggtgagatcgctgcggcctacgccgccggcggcttgtctgatcgcgat
gcgatgaccattgctatccaccgtgctcgtttgatgggcgagggcgaaaagtcactacct
gaggaccaactcggcgctatggccgtggtggaattctccgtggaggcgctggaggagttc
cgtcaacaaaacccagagttcagcggtgtggagccagccgtgtatgcagcccctggcatg
accactgtgggtggcccacgtgaggccgtgatcaagttggtggaaaaacttgaggcagag
ggcaagtttgcgcgtttgctcaatgtgaagggcgcaggccacacaagtgctttggatccg
ctgttgggtgagctcgcagctgaaacctcgatgattgagccgaaaccactgcgcattccg
ctgtatagctcggtggatcgcgcgactgtatatcctgtcggttcggtggtgcacaccacc
gattactggttgcgttgtacgcgtcagtcggtgtggttccaagacgcaacagagcaggcg
tttgcgcatggagccatgatgctggtggagatttctccgaatcctgttgcgctgatgccg
atgatgaacaccgcctttagtgttggtaagtcggatgcgcagttgttgtttgcgttgaag
cgcaaggtggacgaggtggcgtcgatacgcgacctgttggccaagatttatgttacgggc
gcgccgatttcctttgactatggcgatggggagattattcctgcgccgcatattccatgg
aagcgtcagcattattggacgtctgcgcggccgtcgtcaggcaatcgtgttgcgatgccg
ggcacgaaggttacgctgccaggtggcgcgctggcgtttacgatggtcgccgatcaggtg
ccgtccaccgcagcgcttatcgacgctaccgtcacctccgtacaaccaggcgcgcaggtg
ctcgcgatttctgaaaccgcaacgctgcccgcaaccggtgagctgaccacggttgctacc
ccgaatgttggcggtgtggcagtggtggtttaccgcgtgattgacggtcaaacccagcag
atcgccgaggcatttgccaccacacttagtgccccgcatacctcagccgctgaggctgct
cctgattcggtggtaggcacagtggttgaggtagaagccccagaggtgcccgataacctg
ttgtgggatcccgccacggagactgtggaggagcgcctgcgcgctatcgtttctgaggcc
atgggctatgatgttgaggatcttcctcgcgagctgccactgatcgatctgggcttggat
tccctgatgggcatgcgcattaagaaccgtgtggagcatgacttccagattccgccgctg
caggtacaaaccctgcgcgatgcttctgttgcagacgttgttgctcttctggaggaactc
gttgccgaccgtggcgcagcccagcccgtcgaaactgaaatcgctatcgagcacactgct
accgccgcggaatcccatgaggtgggcgtggcgccacgtgatgcttccgagcgtttggtc
tttgctacatgggccggtatcacaggggctgcggcagctggggtgaccagcactttgccg
gaaatcactgaggagcaggctcgagaaatcgcagagcgcctcacagagcgtgccggtgtt
gcgatgtctgcggagcaggtgcagcaggcggaaacgcttgaacctttggccaacattgtg
cgcgagggattagaaaccgatgtggagggcaacatccgtgtgctgcgtgcccgccctgag
ggctccacgcaaccagctgttttcatgttccatccagctggcggtagttccgtggtgtat
cagccactgatgcgtcggttgcctgcggacgttcctgtctacggtgtggagcgtcgtgaa
ggctcgttagaggaacgcgccgcagcttaccttgatgagatcaagcagtactccgatggc
ctgcccatcattttgggcggttggagcttcggtggcgcgttggcttatgaagtggcttac
cagctgcaggattccgacgtggagatcgcaacgattgctttgctggacaccgtgcagcct
gcgcatttggcgccggatactaaggaagaaactgttaagcgttgggagcgctactcggcg
tttgctaagaagacctatggtcttgatttcccagtgccctatgagctgctggaaaccgct
ggtgaagatgcgctattggcgatgatggcggagttcttgtccaccactgatgctacagag
cacggtttgtcggcgggtgtgctggagcaccagcgtgcttcctttgtagacaaccgcatt
ttggaccgtatggacatgcagcgctgggcgagcgtgaagattccggtgatgttgttccgt
gctgagcgcatgcatgatggggccattgagctggaacccgcgtacgctgagattgagcct
gatggcggatggtcggctatcgttgaggatttggtgatcatccaactatctggcgaccac
ctagcagtggtggatgagccggagatcggtaaggttggtgtggcgctcaccaacaggatt
gaacagctacagggtaagtag
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