Corynebacterium diphtheriae HC02: CDHC02_0662
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Entry
CDHC02_0662 CDS
T01694
Name
(GenBank) DNA helicase II / ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cde
Corynebacterium diphtheriae HC02
Pathway
cde03420
Nucleotide excision repair
cde03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cde00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CDHC02_0662
03430 Mismatch repair
CDHC02_0662
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cde03400
]
CDHC02_0662
Enzymes [BR:
cde01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CDHC02_0662
DNA repair and recombination proteins [BR:
cde03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CDHC02_0662
MMR (mismatch excision repair)
Other MMR factors
CDHC02_0662
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AEX76157
LinkDB
All DBs
Position
677919..681212
Genome browser
AA seq
1097 aa
AA seq
DB search
MRSMQNQNDVPSSAGRKDGPKMLSPQELSRALGQKFPPTPQQADVISSPLAPTLVVAGAG
AGKTETMAARVVWLVASGLVDPDRVLGLTFTRKAAQQLSKRIRDRLEQLAGIENLRDLDP
TGALATKLEAIAPTVSTYDSYAGRLISEYGLLLPVEPSSRLISQTELFQIAHSIVSAHTG
ALNTSNSPNTVTSTLMSLVSEMDNHMVSPTDIEEESAAFLAMIEDVEATSKRAPSKEVYK
WRDIQVLRNELLPLVQQLKTHLADNHLMTFGEQMSLAARLAAENPQVGASQRNRYQIIML
DEYQDTGHAQRVLLKSLFAGTAVTAVGDPMQSIYGWRGATAANLERFLTDFGSNGAPATK
KELTVSFRNPPEVLDLANRVSRELLGVPEDPRRPVQPLEPGPAALNGTVRLGFFPSMDEE
RSYVADHLAQAYEQHDGNHPFTAAVLVRKRKHSAAIALELQQRGVPVEIVGLAGLLGIPE
VADLVAIATLLVRPYDTQAAMRILAGPSVGLGMADLMALSDRAYNLSGRDRRATTELSRD
PLKRLKQIIADTIPSDQDSIVGLAEAVADLDERLDSSDGPRYSAKGSERLRTLAARLRYL
RTNSLSNSLPDLFADIERVFGIRTEVLQREDPRSDGATGTAHLDRFAEVVQDFSRIPGAN
LGLLLDYLSLAESEENGLEPGEVQVTADRVQILTVHKAKGLEWQHVAVLHADANTYVAKA
STWLTNASAVPSALRGDAKGDEDLVGAPVFEIDTPDTAAELAKAGKAHIADFKQVAAEEN
ARLFYVAITRAEQQVLVTASADPSKKRPVLPYEYLTMLRNDFPDSVEEWHERGEAEDYVP
PAPQEAVFPPNYTVVGAEDVFAAMQKQPDLIRDDDLFERWEKEVSALIEEHEQLSAPVVA
VDIGVELTATDIVNLAKNPENFAQRRRRPVPFKPNSYAKRGTAFHEWLENRFGAEALLDE
TELPGIGEELDDSDLDRLKEAFLDSEWADRTPEHVEHPFEVSIGHHIVRGRMDAVFKNPD
GRWIVVDWKTGQPPTDNHEKESVAMQLAVYRLAWARLQGIDVDRVDAAFHYVGRNVTYRP
QQLPDGEELALKLDPSV
NT seq
3294 nt
NT seq
+upstream
nt +downstream
nt
atgcgatcaatgcaaaatcaaaacgatgtgcccagttcagccggaaggaaagatggtccc
aaaatgctaagccctcaagaactctcgcgcgcactgggacaaaaatttccaccaacgccg
caacaagcagacgttattagctcaccccttgcccccacactcgtggttgctggagcaggt
gcaggaaaaacggaaacgatggctgcccgcgtggtgtggctcgtggctagtggactcgtt
gacccagatcgtgttttagggctcaccttcacgcgtaaagcagcacagcagttatccaag
cgaattcgtgatcggcttgagcaattggcagggattgagaacctgcgagatctggacccg
acaggcgcattagcaaccaaactagaagcgatcgcccccacggtatctacctacgactcc
tacgcaggacgattaattagcgaatacggtctattgctgccagtggagccatcatcacgc
ttgatttcgcaaacggagctattccagattgcgcattcgatagtgtctgctcacacgggt
gcactcaatacctcgaattcacccaatacggtgacctccacgctgatgtctttggtttcg
gaaatggacaaccacatggtgtcgcccacagacattgaagaagaatcagcggcatttctt
gccatgatcgaagacgtcgaagcaacaagtaaacgggcaccaagcaaagaggtgtacaaa
tggcgagacatacaggtgctgcgcaatgaactactgccactagttcaacagctaaaaaca
catctagctgacaaccacctcatgacctttggcgagcaaatgtctttagcagcccgcctc
gctgcagaaaatccacaggtgggagcgtcgcaacgcaataggtatcagatcatcatgctt
gatgaataccaagatactggccatgcgcagcgtgttttgctcaaaagcctatttgctggc
accgcggtcaccgcagttggtgaccccatgcaatctatttacggatggcgtggtgccact
gcagccaacctcgaaaggttccttacagacttcggaagtaacggtgctcccgccaccaaa
aaagaactcaccgtgtcgtttagaaatcctcctgaggtcctcgacttagctaaccgagta
tctcgggaactgctgggcgtacccgaagatccgcgacgaccagtgcaacctctcgagcca
ggccctgcagcattaaacggcacagtgagattgggttttttcccatcgatggatgaagag
cgatcctatgttgctgatcatttagctcaagcatatgagcaacacgatgggaatcatccc
tttactgcggctgtgcttgttcgcaaacgcaagcactcggcggcaattgctctggaatta
caacaacgcggcgtcccagtagaaattgttggactcgcaggactactcggtattccagaa
gttgcggatttagtagccattgccacattgttggtgcgtccttacgatactcaagccgct
atgcgtattttggcaggacccagcgtaggacttggtatggcggacctcatggctttgagc
gatcgcgcatacaacctcagtggtcgagatcgacgtgccacaacggaattatcgcgtgac
cctctcaaacggttaaaacagatcattgccgatacaattcccagtgaccaagattctata
gtgggtcttgcagaagcagtggctgaccttgatgaacgcctcgacagcagcgatggtccg
cgatatagcgccaaaggtagcgagcgactccgcacactagcggcacggctgcgctatcta
cgcaccaatagcttgagcaactcattaccggacctctttgccgatattgaacgagtattc
ggcatacgcaccgaggtcctacaacgagaagatccccgtagcgatggtgcaaccggcacc
gcacacctcgatcggttcgccgaggttgttcaagatttctcacgcatcccaggcgccaac
cttggtctgcttctggactacctctcgctggcggaatctgaagaaaacggacttgaacct
ggtgaagtacaagtgactgctgaccgcgtccagatccttaccgtgcataaagccaaaggc
ctagaatggcaacacgttgcggttttgcatgccgacgccaacacctatgtggctaaagct
tcgacatggctcaccaatgcttctgctgtgccttcggcacttcgcggagatgccaaaggt
gacgaggatcttgtaggcgcgcccgtttttgaaatcgacaccccagatactgcagcggaa
ctagcaaaagctggaaaagcgcatattgctgatttcaaacaagtggctgcggaagaaaac
gcgcgcctgttttacgtcgcaattactcgagcagaacaacaagtacttgtcacagcttct
gccgatccctcaaaaaaacgtccagtcctgccttacgaatacctcactatgctgcgcaac
gatttcccagacagcgttgaagaatggcatgaacgtggtgaagcagaagactatgtgcca
ccagcgcctcaagaagccgtattcccgccgaactacaccgttgtcggcgcagaagacgtg
ttcgccgccatgcaaaagcaaccagatctgatcagagacgacgatctgtttgaacgatgg
gaaaaagaagtaagcgctctgatcgaagaacacgagcaactttccgcacccgtcgtcgca
gtcgatatcggagtagagcttacagccacagacattgtgaaccttgcaaagaaccccgag
aactttgctcaacgcagacggcgtccagtgccatttaaaccaaactcatacgccaagcgc
ggtacggcattccacgaatggctagaaaaccgctttggtgcagaagcattacttgatgaa
actgagctgccgggtatcggagaagaacttgatgactcggacctcgatagattgaaagag
gcgttcctagacagtgagtgggcagaccgaaccccagaacatgtagagcacccctttgaa
gtatcaattgggcaccacatagttcgtgggcgcatggacgcagtgtttaaaaaccccgac
ggacgatggatcgttgtggattggaaaacgggacagcccccaacagacaatcacgaaaaa
gaatcagtggccatgcagctggcagtttatcgactcgcatgggcacgacttcaaggaatt
gatgtggatcgagttgacgcagcattccactatgtgggcagaaatgtgacataccggcca
caacaattgcctgatggggaagaacttgcattgaaactagacccaagcgtgtag
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