Corynebacterium diphtheriae HC02: CDHC02_0665
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Entry
CDHC02_0665 CDS
T01694
Symbol
uvrD
Name
(GenBank) putative DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cde
Corynebacterium diphtheriae HC02
Pathway
cde03420
Nucleotide excision repair
cde03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cde00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CDHC02_0665 (uvrD)
03430 Mismatch repair
CDHC02_0665 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cde03400
]
CDHC02_0665 (uvrD)
Enzymes [BR:
cde01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CDHC02_0665 (uvrD)
DNA repair and recombination proteins [BR:
cde03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CDHC02_0665 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
CDHC02_0665 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
HHH
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AEX76160
LinkDB
All DBs
Position
683053..685104
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AA seq
683 aa
AA seq
DB search
MINLDDLDDDQRAAAEAPRGPVAILAGAGTGKTRTITYRIAHLIDRGMASPHRVLAVTFT
RRAAGEMRHRLGLMGVGGVQAQTFHSAALRQLRYFWPQVAGNLPWRIVDNKFSLVGRATR
SVGVESSTENVRDLLSEIEWAKAALITPDNYVERLNGRKTPVAAEKVAEVYRRYEQSKTT
PEGMLLDFDDLLLHTAGAIENSAAIAEEFRQQYRTFVVDEYQDVTPLQQRVLDAWLGERD
DLTVVGDANQTIYSFTGASPDYLLGFSRKYPHATVVKLQRDYRSTPQITDLANRVIDQAV
GRIAGTRLELEGMRTAGPQPEFQEFSDEPAEAHAVALKIKQLLTQGVPASEIAILYRINA
QSATFEQALDDAGIVYQVRGGEEFFQRSEIKQAMSEIIRATQRDDLPDARGVDLERIVRA
ILAPLGLSKHEPEGARARERWQSLEALAELSLEIGQATPDLNLQGLLAALNQRASAKHPP
TMQGVTLASLHAAKGLEWDAVFLVGLVDGTLPISHAMKAGDHAIEEERRLFYVGVTRARE
ILYCSWAKARQEGGRATRKRTRFLDSIVLEVDVSSVPPRSKRRQRCRVCGTTLNSPAERI
VGRCDQCPSGVDGEVFETLRKWRADTARELNVPAYIVFTDATLHAIAENLPQSAEELMQI
SGIGQVKVERFGPGLLETLAQFQ
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgattaacttggatgatcttgacgatgaccagcgtgcagccgccgaggcgccgcgtggt
ccggtagccattttggcaggcgcaggaacaggtaaaactcgtacgatcacctaccggata
gcgcacttgattgaccgtggcatggcaagccctcatcgcgtgctcgcagttaccttcacg
cgtcgcgctgctggggaaatgcggcatcgtctgggattgatgggcgttggtggcgttcaa
gcccaaacatttcactctgctgcgctgcgacaactacgctatttttggccacaggtagcc
gggaatttgccatggcgaattgttgacaacaaattttcactggtgggtcgcgcaactcgt
agcgtcggggtggaatcctcaacagaaaatgttcgagatctactcagcgaaatcgaatgg
gccaaagcagcactgatcactcctgataactatgtggaacgcctcaacgggcgcaagact
ccagtagcagccgaaaaagtggcggaagtatatcgacgatacgagcagtcgaaaactaca
ccggaaggaatgctgctcgactttgatgacttgctgcttcataccgccggagccatcgag
aattctgctgctatcgcagaggaatttcggcaacaataccgcacgttcgttgtcgatgag
taccaggacgtgacgccactgcaacagcgggtcttagacgcatggcttggtgagcgtgat
gacttgaccgtggtgggcgatgccaatcagacgatctactcgtttacaggcgcttcacca
gactacttactggggttttcacgcaaatatccccatgccacggtggtgaaactgcaacga
gactaccgttctacaccgcaaattacagatcttgctaaccgcgtgatcgaccaagcagta
gggcggatcgcagggactcggttggaattagaaggcatgcgtacagcaggaccgcaacca
gaatttcaagaattcagcgacgaacccgcagaagcacacgccgtagccttgaaaatcaag
cagcttctaacacaaggcgttcctgcctccgagattgcgattttgtaccgcattaatgcc
caatccgcgactttcgaacaagccctcgatgacgccggaattgtgtatcaagttcgtggc
ggtgaggaattcttccagcgttcggaaatcaaacaagcgatgtcagagatcatccgagct
actcagcgtgatgaccttcccgacgctcgtggagtagacctagaacgcatcgtgcgtgca
atcttagcgccgctgggcttgagcaaacatgaaccagaaggcgcccgcgcacgggaacgc
tggcagtcgttggaagctcttgcagaactgagcttggaaattggccaagcgacaccagac
ttaaaccttcaagggttattagcagcgctcaaccagcgcgcaagcgccaagcatcctcct
accatgcaaggggttaccttggcatccctccacgcagcgaagggcttggaatgggatgcc
gtgttcctcgttgggcttgtcgacggcaccctgccgatctctcacgcaatgaaagcgggt
gatcatgccatcgaggaagaacgccgcctgttttatgtgggcgtgacgcgtgcccgagaa
attttatattgctcgtgggcaaaagcgcgccaagaaggcgggcgtgcaacacggaagcgg
actcgttttttggacagcatagttcttgaagtcgatgtttcctccgtaccaccacgctct
aaaagacgccagcgctgtcgtgtatgcggcaccacattgaacagtcccgcagaacgcatc
gtaggacgctgtgaccaatgccccagcggagttgatggagaagtgtttgaaactctgcgg
aaatggcgagcggatacagcccgtgaactcaacgttccggcctatattgtgttcaccgat
gccaccttgcatgcgatagccgaaaatcttccgcaatccgccgaagagctgatgcagatt
tctggaatagggcaggtcaaagtagaacgttttggcccaggtctgctagaaacgcttgct
cagttccagtaa
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