Corynebacterium diphtheriae HC02: CDHC02_1365
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Entry
CDHC02_1365 CDS
T01694
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
cde
Corynebacterium diphtheriae HC02
Pathway
cde03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cde00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CDHC02_1365 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cde03019
]
CDHC02_1365 (pnp)
03016 Transfer RNA biogenesis [BR:
cde03016
]
CDHC02_1365 (pnp)
Enzymes [BR:
cde01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
CDHC02_1365 (pnp)
Messenger RNA biogenesis [BR:
cde03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CDHC02_1365 (pnp)
Transfer RNA biogenesis [BR:
cde03016
]
Prokaryotic type
tRNA degradation factors
CDHC02_1365 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
KH-I_KHDC4-BBP
RNase_PH_C
KH_2
OB_cyt-4
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
AEX76854
LinkDB
All DBs
Position
complement(1459419..1461686)
Genome browser
AA seq
755 aa
AA seq
DB search
MSTKPSNVVFNIDEEFGITEAIATIDNGDFGKRTIRFETGQLARQADGSVTTYLDDDTML
LATTTASNQPREGFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTEAILACRLIDRPLR
PTFVKGLRNEVQVVITVLSVNPQDMYDVVAINGASAATQLSGLPVSGPVGGVRMALIADD
AHPKGQWIAFPTHEQHEQALFELVVAGRIVSKKQGKKTVDDVAIMMVEAGATEQVVDRVK
AGAPAPTESVVAEGLEAAKPFIEVLCRAQAGLAERAAKETQEFPLFPPYTDVVYDAVEKK
VSKKLRSLLTIKSKQDRDEATNAYMEEIEADLIAQLGSDDEAAASKAIRAAYNAVMKKIV
RHMILTEHFRIDGRGVTDIRDLGVEVDLIPRAHGSSLFERGETQILGVTTLDMLKMEQQI
DSLTPATSKRYIHHYNFPPYSTGETGRVGSPKRREIGHGALAERALVPVIPSREEFPYAI
RQVSEALGSNGSTSMGSVCASTLSLYNAGVPLKAPVAGIAMGLVSDEVDGETRYVALTDI
LGAEDAFGDMDFKVAGTRQFITALQLDTKLDGIPSEVLAQALSQANDARNTILDTMAEVI
ETPDEMSDYAPRITAITVPVNKIGEVIGPKGKTINSITEETGASISIEEDGTVYVSAASG
AAAEAAIEKINAIANPQLPKVGERFLGTVVKTTAFGAFVSLLPGRDGLVHISKLGGGKRI
EKVEDVVNVGDKLEVEILDIDNRGKISLAPVKNED
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
ttgagcacaaagccttccaacgtcgtctttaacattgacgaggaatttggaatcaccgag
gcaatcgcaaccatcgataacggtgattttggaaagcgcaccatccgttttgaaaccggc
cagttggcacgccaagcagacggatcagttacaacctatcttgacgacgacacgatgttg
ttggcaacgaccacggcatctaatcagccacgtgaaggattcgatttcttcccgctgaca
gtcgacgttgaagagcgtatgtacgcagctggtaggatcccaggatcgttcttccgtcgt
gaaggccgtccttccaccgaagcaatcttggcttgccgtttgatcgaccgcccgttgcgc
cccacctttgttaaggggctacgcaacgaggttcaagtagttatcactgttctttccgta
aacccgcaagacatgtacgatgtcgtggcaattaacggtgcctctgcagcaactcagttg
tctggtttgccggtttctggtcctgttggcggtgtccgaatggcactgatcgcagacgat
gctcaccctaaggggcagtggattgctttccctactcatgaacagcatgaacaagcactc
tttgagctcgtcgtagcgggacgtattgtctcgaagaagcaaggtaaaaagaccgttgat
gatgttgccatcatgatggttgaggctggtgctactgagcaggttgtagatcgagttaaa
gctggagctccagctcctacagaatctgtggttgcagaaggtcttgaggctgctaaacca
ttcattgaggttctttgccgtgcgcaggctggattggccgagcgtgcagccaaggaaacc
caagaattcccactcttcccgccatacactgacgttgtttacgatgcagtggagaagaag
gtttctaagaaactgcgttcgttgctcacgatcaagtccaagcaagatcgtgatgaggca
acgaatgcttacatggaagaaatcgaagcagatctgattgcccagctcggatctgatgat
gaggcggctgcatctaaggcaattcgtgcagcatacaatgctgtaatgaagaagattgtc
cgtcatatgatcttgacggaacacttccgcatcgacggtcgcggtgtcaccgatattcgt
gatttaggtgtggaagttgacctcatcccacgcgctcatggttcgtccttgttcgagcgt
ggcgagactcagattctgggtgtgaccactctcgatatgctcaagatggagcagcagatc
gattcattgactccagcaacttcgaagcgttatatccaccactacaacttcccaccgtat
tccactggtgaaactggccgtgttggctcacctaagcgtcgcgaaattggccacggtgct
ttggctgagcgtgcactggttcctgtgatcccaagtcgtgaagaattcccttatgcaatc
cgacaggtgtctgaggctttgggctcgaacggctctacctcgatgggctctgtatgtgcg
tccaccttgtctttgtacaacgcaggtgtaccgttgaaggctcccgttgctggtattgcg
atgggcttggtgtctgatgaagtagacggtgagactcgttatgtcgctttgactgacatc
ttgggtgcagaagacgcctttggtgatatggacttcaaggttgctggtactcgccagttc
attaccgctttgcagctagatacaaagcttgatggcattccttctgaggtgcttgctcag
gcgctatcccaggcgaatgatgcgcgtaacaccattttggatacgatggcagaagtaatc
gaaactccagatgagatgagcgactacgcgccacgtattactgcgattaccgttccagtg
aacaagatcggtgaggttatcggtccaaagggcaagaccattaactctattaccgaagaa
actggcgctagcatttctattgaagaagacggcacagtttatgtttcggccgccagcggt
gctgctgcagaggctgcaatcgaaaagattaacgctatcgctaacccacagctgcctaag
gtcggagagcgtttcctcggcactgtcgtaaagaccactgcatttggggctttcgtatcc
ttgctgccaggacgcgacggactggttcacatctccaagcttggtggtggcaagcgtatc
gaaaaggttgaagatgtagtcaacgtgggagataaactcgaggttgaaatcctagatatt
gacaaccgcggcaagatttccttggctccagtgaaaaacgaggactaa
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