Corynebacterium diphtheriae HC02: CDHC02_1459
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Entry
CDHC02_1459 CDS
T01694
Name
(GenBank) putative DNA polymerase III epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
cde
Corynebacterium diphtheriae HC02
Pathway
cde03030
DNA replication
cde03430
Mismatch repair
cde03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cde00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CDHC02_1459
03430 Mismatch repair
CDHC02_1459
03440 Homologous recombination
CDHC02_1459
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cde03032
]
CDHC02_1459
03400 DNA repair and recombination proteins [BR:
cde03400
]
CDHC02_1459
Enzymes [BR:
cde01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CDHC02_1459
DNA replication proteins [BR:
cde03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CDHC02_1459
DNA repair and recombination proteins [BR:
cde03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CDHC02_1459
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
PTCB-BRCT
Neisseria_TspB
BRCT
Motif
Other DBs
NCBI-ProteinID:
AEX76948
LinkDB
All DBs
Position
1565127..1566473
Genome browser
AA seq
448 aa
AA seq
DB search
MSGLIPAHGLSFRVDASTLTGQSSLLRASLGLDDVHLQVSAITEVKSVFVADAFDRGLVT
VTADKEIAIWFPPNSATEQELFVRTLSAAMNGDGPIPQPVPHLDFVAVDVETANSDWGSI
CQIGAAKVRDGHVVETKEWLCTPPGDLNSFDEANIAIHGITADMVATAPSFAECYDQFAD
FAGDLPLAAHNAQFDMTAFLRATQAADIRLRTTNFGCSLAAARAAHLPIANHKLPTVSQH
LHVELRNHHNACADAEACAGILIALTQRLNTEITDFTSAFNMLGFHTGQLSDARVYPVLK
VRGASSTPASPDSAAPAIQTPPAEKPRKATKAARAPWSKVATPETIPDPNPDADPQGRLF
GQSVTLSGDFAPYDKGELWAGIANQGGIIGKNVTKKTTILVCGPWDKPTSKQKRAEELRA
KGQEIDLWTQEDLFAQLGLNPEDEQPPF
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgtccggcctcatcccagcacacggtttaagcttccgcgttgatgcctcgacgcttaca
ggtcagtcgtcgctactgcgtgcaagcctagggcttgacgacgtccacctgcaggtttcc
gccatcacagaagtaaaatcggtgtttgtagctgacgcctttgaccgcggactagttact
gtcactgccgacaaagaaattgctatttggttcccgcctaatagtgcaaccgaacaagaa
ctttttgttcgtacactgtcagcagcaatgaatggcgatggccctattccccaacccgtg
ccccacttagattttgtggcggtcgatgtagaaacagctaatagcgactggggttctatt
tgtcagatcggtgcggctaaagtacgagatggtcacgttgtagaaaccaaagagtggcta
tgcaccccaccaggcgatttgaattccttcgacgaagctaacatcgccattcacggcatt
accgcagatatggtcgcaactgcgcctagcttcgctgaatgctacgaccaatttgctgac
ttcgcaggagatcttccgctggctgcacacaacgcacaatttgatatgactgctttcctg
cgtgctacccaagctgctgacatccgcctgcgcaccaccaattttggttgttctctcgct
gccgcgcgcgcagcacacctacctattgcgaatcataaacttcccactgtctcacaacat
cttcatgttgagcttcgaaatcaccataacgcttgtgcggatgccgaagcctgtgccgga
attctcatcgctcttacgcaacgtctgaacaccgaaatcactgattttacctccgcattt
aacatgctagggttccacactggtcaattatccgacgctcgtgtgtatccagttctcaaa
gttcgtggtgcctcgagcactccagcttcacctgattccgctgcccctgctattcaaacc
ccaccagcagaaaaaccccgcaaagcaaccaaagcagcgcgggcaccgtggtcgaaggtg
gcaactccagaaacaatccctgaccctaatcctgatgccgatcctcagggccggctcttt
gggcaatctgtcacgcttagcggcgatttcgccccctacgacaaaggcgagctgtgggct
ggaattgcgaaccaaggaggcattattggcaaaaacgtcacgaaaaagacaaccatcctt
gtatgcggcccatgggacaaaccgacttctaaacaaaaacgtgccgaagaactgcgcgcc
aaaggccaagagattgacctatggactcaagaagacctgtttgcgcaactaggtcttaat
cccgaggacgaacaaccaccgttttaa
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