Corynebacterium diphtheriae HC02: CDHC02_1912
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Entry
CDHC02_1912 CDS
T01694
Name
(GenBank) hypothetical protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
cde
Corynebacterium diphtheriae HC02
Brite
KEGG Orthology (KO) [BR:
cde00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cde03016
]
CDHC02_1912
Enzymes [BR:
cde01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
CDHC02_1912
Transfer RNA biogenesis [BR:
cde03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
CDHC02_1912
Prokaryotic type
tRNA splicing ligases
CDHC02_1912
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
DUF1269
Motif
Other DBs
NCBI-ProteinID:
AEX77401
LinkDB
All DBs
Position
complement(2055123..2056283)
Genome browser
AA seq
386 aa
AA seq
DB search
MRLHNFASIVEDKTVAQAQLVADLPFVYPHVALMPDAHFGKGSSVGTVFGTLRAVIPAAV
GVDIGCGMIAVRTHLTHADIQDFALEDLRTAVEDSIPLSPGNYNGWIMDPSTEARTRELA
QLAQDTGVDLGHSKNWRRQLGSLGGGNHFIELCLDEDDRVWLFLHSGSRGVGNKIAQKHI
KAAQRHCEKHWIQLADKDLAYLVEGTPEFDSYIADLHWAQHFALLNRDEMMDRFLDCVAT
WSGADREALELERINCHHNYTQRENHYGKNVWLTRKGAIKADEGDRGLIPGSMGTASYVV
EGKGYAPGLKSAPHGAGRVMSRTQAKARFTEADLAARMEGIVYRPGAEFVDEIPDAYKDI
DRVMADAAQLVEVKHTLRQILNVKGT
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctgcacaacttcgcctccattgttgaagacaagacggtggcgcaggcacaactc
gtcgctgacctgcccttcgtctacccacacgtggcgctcatgcctgatgcccactttggc
aaaggctcttcggtcggcactgtcttcggcacgctgcgcgccgtcatcccggcggctgtc
ggcgtggacatcggctgcggcatgattgccgtgcggacccacctcacgcacgcggatatc
caggacttcgctctcgaggacctgcgcaccgcggtcgaagattccattccgctctcgccc
ggaaactacaacggctggatcatggacccgagtaccgaggcccgcacgcgcgagctcgcg
cagttggctcaggacaccggcgtggatctcggtcactccaaaaactggcgtcggcagctg
ggcagcttgggcggcggcaaccacttcatcgagctgtgtctcgacgaagatgaccgcgtc
tggctgttcctgcattctggctcgcgcggcgtgggtaacaagattgcacagaagcacatc
aaggccgcgcagcgccactgcgagaagcactggatccagctcgcggacaaggacctggcc
tacctcgtcgagggtacgcccgagttcgactcctacattgcggatctccactgggcacag
cactttgcgctgctcaaccgcgatgagatgatggaccgcttcctcgactgcgtcgccacc
tggtcgggcgcggatcgcgaggccctcgagctcgagcgcatcaactgccaccacaactac
acccagcgtgagaaccactacggtaagaacgtgtggctcacacgcaagggcgccatcaag
gcggacgaaggcgaccgcggcctcatccccggctcgatgggcaccgctagctacgtcgtg
gaaggcaagggctacgcgccgggcctcaagtctgcgccgcacggcgccggccgcgtcatg
tctcgcacccaggccaaggcccgcttcaccgaggcggaccttgccgcacgcatggaaggc
atcgtctatcgtcccggcgccgagttcgtcgatgagattccggacgcctacaaagacatc
gaccgcgtgatggccgatgccgcccagctcgtcgaggtcaagcacaccctgcgccagatc
ctcaacgtcaagggcacctaa
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