KEGG   Corynebacterium diphtheriae HC02: CDHC02_2161
Entry
CDHC02_2161       CDS       T01694                                 
Name
(GenBank) putative DNA repair glycosylase
  KO
K10563  formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
cde  Corynebacterium diphtheriae HC02
Pathway
cde03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:cde00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    CDHC02_2161
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cde03400]
    CDHC02_2161
Enzymes [BR:cde01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     CDHC02_2161
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     CDHC02_2161
DNA repair and recombination proteins [BR:cde03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     CDHC02_2161
SSDB
Motif
Pfam: H2TH Fapy_DNA_glyco zf-FPG_IleRS Auto_anti-p27
Other DBs
NCBI-ProteinID: AEX77648
LinkDB
Position
2373056..2373910
AA seq 284 aa
MPEGHVIHRLADQLNHHFASTQATPDTQPRRPLLVTSPQGRFVTEAAQLNGHALDHAEAW
GKHLFLCFDNDNPAHIVHIHLGLIGSMRLEDPADVWGQIRFRIEDPKQPTTSVVAANLRG
PQWCRLITEAEMTTATAKLGADPLRDDANFLAIKTKVARSRRSIGSLLMDQKLFAGVGNI
YRAETLFRLGISPFILGKDVAELDLIWQDLRFLMREGVNRGRIDTVRPEHTPEAMGRPPR
KDDHGGEVYVYRRYGQPCYVCGTPILERTMEGRNLFWCPTCQPD
NT seq 855 nt   +upstreamnt  +downstreamnt
atgcccgaaggtcacgtcatccatcgcctcgcagaccaactcaaccatcatttcgccagc
acacaggcaacaccggacacacaaccccgccgcccgctactggtcacctccccacaaggt
cgctttgtcacagaggccgcccaactcaacggtcatgcactcgaccacgccgaggcatgg
ggcaaacaccttttcctgtgttttgataacgataatcccgcccacatcgtccacatccac
ctcgggcttatcggaagcatgcgcttagaagacccagccgatgtgtggggtcagattcga
ttccggatcgaagacccaaaacaacccaccaccagcgtggtagcagcaaacctgcgcggc
cctcagtggtgcaggttgattacggaggcagaaatgaccaccgccaccgcaaagctcggc
gccgatccgctacgcgacgacgccaacttcctagcaatcaaaacaaaagtggcgcgctcg
cgtcgcagcatcggttccctactgatggaccagaaactctttgccggcgtaggcaatatc
taccgtgccgaaacactcttccgcctaggaattagcccctttatcctcggcaaagatgta
gcagagctcgacctcatctggcaggatctacgttttctcatgcgcgagggggtgaacagg
ggtcgaattgatactgttcgcccggagcacacaccggaggcgatggggcggccgccacgc
aaggatgaccacggtggcgaggtgtatgtgtatcgccgctatggtcagccgtgttatgtg
tgcggcacgccgatccttgagcgcacaatggagggtcgcaatcttttttggtgtcctacc
tgccaacctgattag

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