Corynebacterium diphtheriae HC02: CDHC02_2161
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Entry
CDHC02_2161 CDS
T01694
Name
(GenBank) putative DNA repair glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
cde
Corynebacterium diphtheriae HC02
Pathway
cde03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cde00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CDHC02_2161
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cde03400
]
CDHC02_2161
Enzymes [BR:
cde01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
CDHC02_2161
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CDHC02_2161
DNA repair and recombination proteins [BR:
cde03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CDHC02_2161
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
AEX77648
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All DBs
Position
2373056..2373910
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AA seq
284 aa
AA seq
DB search
MPEGHVIHRLADQLNHHFASTQATPDTQPRRPLLVTSPQGRFVTEAAQLNGHALDHAEAW
GKHLFLCFDNDNPAHIVHIHLGLIGSMRLEDPADVWGQIRFRIEDPKQPTTSVVAANLRG
PQWCRLITEAEMTTATAKLGADPLRDDANFLAIKTKVARSRRSIGSLLMDQKLFAGVGNI
YRAETLFRLGISPFILGKDVAELDLIWQDLRFLMREGVNRGRIDTVRPEHTPEAMGRPPR
KDDHGGEVYVYRRYGQPCYVCGTPILERTMEGRNLFWCPTCQPD
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaaggtcacgtcatccatcgcctcgcagaccaactcaaccatcatttcgccagc
acacaggcaacaccggacacacaaccccgccgcccgctactggtcacctccccacaaggt
cgctttgtcacagaggccgcccaactcaacggtcatgcactcgaccacgccgaggcatgg
ggcaaacaccttttcctgtgttttgataacgataatcccgcccacatcgtccacatccac
ctcgggcttatcggaagcatgcgcttagaagacccagccgatgtgtggggtcagattcga
ttccggatcgaagacccaaaacaacccaccaccagcgtggtagcagcaaacctgcgcggc
cctcagtggtgcaggttgattacggaggcagaaatgaccaccgccaccgcaaagctcggc
gccgatccgctacgcgacgacgccaacttcctagcaatcaaaacaaaagtggcgcgctcg
cgtcgcagcatcggttccctactgatggaccagaaactctttgccggcgtaggcaatatc
taccgtgccgaaacactcttccgcctaggaattagcccctttatcctcggcaaagatgta
gcagagctcgacctcatctggcaggatctacgttttctcatgcgcgagggggtgaacagg
ggtcgaattgatactgttcgcccggagcacacaccggaggcgatggggcggccgccacgc
aaggatgaccacggtggcgaggtgtatgtgtatcgccgctatggtcagccgtgttatgtg
tgcggcacgccgatccttgagcgcacaatggagggtcgcaatcttttttggtgtcctacc
tgccaacctgattag
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