KEGG   Cryptococcus decagattii: 89987271
Entry
89987271          CDS       T10966                                 
Symbol
IAS62_000495
Name
(RefSeq) uncharacterized protein
  KO
K12600  superkiller protein 3
Organism
cdec  Cryptococcus decagattii
Pathway
cdec03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cdec00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    89987271 (IAS62_000495)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cdec03019]
    89987271 (IAS62_000495)
Messenger RNA biogenesis [BR:cdec03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ski complex
     89987271 (IAS62_000495)
SSDB
Motif
Pfam: TPR_1 TPR_2 TPR_8 TPR_16 TPR_17 TPR_12 TPR_19 TPR_CcmH_CycH TPR_14 TPR_11 ANAPC3 TPR_9 TPR_7 TPR_6 ARM_TT21_C NatB_MDM20 TPR_20 PIN-TPR-GreABC TPR_5 Sel1
Other DBs
NCBI-GeneID: 89987271
NCBI-ProteinID: XP_064718457
LinkDB
Position
1:complement(join(1283320..1283890,1283945..1286054,1286118..1286530,1286579..1286736,1286783..1287087,1287135..1287391,1287441..1287889,1287938..1288013,1288061..1288197,1288249..1288306,1288360..1288487))
AA seq 1553 aa
MATKSALKSIKAHLGEKNSESALYEATELLKSIGPDSSDADQVLVFRGLALTQLQRLDEA
EKSYLHAYKLNPNNPLASVGLRRLYDKDQNWEKLATLLEVQVQTAFEKQDDEKLAEALKE
LLDAREKHGPDEKLYRTLNLLLPSSPVAGLLQSVTPPQGTYVPLATPVYPPTSDNLPGLP
SPLPHPIHLAGSLSLALVSLIRTEIEIKKKIDARVDNERKRLGAGTEKDVRKKVDREILG
TEGMALVNLWKEVAGHPQVEEEVRREVEVREFQFWRRLVAALPVDNKTASKSKESAGKVS
QAEIPAKASNELVEPALFKAKQYVTPSRTEALSHVNALAEGFVLLDISAKGAEEGWRWVL
EGKDEPTLFYDIDLLHKYLDAFPNSPMACFIEEYCRWFKRPLPEMEEDSSKPEALEGDKK
VEDSDKQRKRHKGGRGALAKRQSRRAHLKKTHVSEDVEKEEREELFSSMTKLVDQLPMSI
FAHRVMARIALEDEDWSSAIGFAERARKLLTGLEAERDITLTNVRADLDTALGVALVPYY
PPKHHVRAARILETVLKTRPTNNEARFARAQIYETAGQWSDARQHFEKIVQDGLNEKQRL
DSKEEVGWCLVNEGKLEEGRDMLEEVIQVRDTKTEKEKEAEARERGRTWWRLGKTEWMIG
DEESKQHAEEWFMASIRAFPDFAASYTSLGVCYSSATPPDNERALKCFQRAFELDARETD
AAYRLANGYADEDEWARVRTIAMRVMEGEGGLEGVAGGEALNPKGRFAPQNGWAWKALGS
TEMHYKKFAEAAAAYQIALRADDQDVSTWIMLGESYVKSGRHMAGLKTFDHALTLNPHHW
RAYYNIGQTQSQLGAFDKAIEAYRKVLEITQNEDVGVIAALAEASLSLGRQTGAGGFRER
SRGAFHRAIELAMKVLKTGKTHKAWGWKLIGDATYELSGQESSLEEAQDSFTVVQSVLTF
LVEDDTDRRSKAPGVGHAANLLQDAVSTTTSLRASIFAFAYRAHILKNEPRVIDPALYDY
ASALHTLASKLVDTEERKQCLKTAISAIRTALDRNAGDERLWNALGVICATAGPQVAQHA
FVVSLELYSKDPVVWVNLGYLYLRLDDLDLASQCFLKAQIIDPDYARAWYGQGLLADRHG
DKEHAKALFSHSVTLSAQSLLEADLALAAATFMQFFRPNASVDSGLLHQPAFALKHYCHQ
RPGDSTAAHLYALICERLGLVEEAALSLENAAAVLEDEFERAESGEIENLYSIALCNLGR
VRLSAGQYLESLDALNNCWELIASSSEPSAVSLKPQCKLLQGLAFYWLGQIDESLEAFQA
SLDEAIQNQDYEVKEKVAVLLSRTLWGLGGKDAKETAKSNLMECLSRERPSLEVISTLAA
IALVSSDADLTNAAISELFTRPIAERVQDPSGQASLVLYLHAIFEGREEDAYEILQSAFQ
AAPTSLSVRNRLAEALLKAGKSKEALDVFAVKDIKEGTADVKAKEKRLLGMGELMEGDAK
GMKTIIRSVMLAPWEDESWQALAWGKKVVEEAGLVEAKEVAKDDAATEIKLTE
NT seq 4662 nt   +upstreamnt  +downstreamnt
atggctacgaagagtgccctcaagtctatcaaggctcacctaggggaaaagaactccgag
tccgctctctacgaggctacggaactcctaaaatccatcggcccagactcatcagatgct
gatcaggttttggtcttccgagggctcgccctcactcagcttcaaagactggacgaagcc
gaaaaatcatatcttcatgcttataaattaaatcccaataatcccctggcatctgtcggg
ctacgaaggttgtacgacaaagaccaaaattgggaaaagcttgcgactcttttagaggtg
caagtgcaaacggcgttcgagaaacaggatgatgaaaagctcgcagaggctcttaaagaa
ttgctagatgccagagagaaacacgggcccgatgaaaagctttatcggactcttaatctt
cttctcccgtcatcgcctgtagcggggcttttacagtcagtgacgccaccccaaggaact
tacgtccctctagctacccctgtctacccaccgacatctgacaacctgcccggtcttcct
tccccgcttcctcaccctatccaccttgctggatctctttctctcgcactagtatctctg
atccgcacggaaatcgagattaagaagaagattgatgcacgggttgataatgagcgcaag
cgtctgggtgctggaacagagaaggatgtcaggaagaaggtcgacagagaaatactcgga
acagaaggcatggcactggtcaatctctggaaagaggttgcgggtcatccacaagtggaa
gaggaggttcgaagagaggttgaagtccgagagtttcaattttggaggcgacttgtcgct
gctcttcctgtcgataacaaaacagcttccaaatccaaagagtctgctggtaaagtctca
caagctgagataccggccaaagcgtccaatgaacttgttgaaccggcgctcttcaaagct
aaacaatacgtaactccgagtcgtactgaagctctctctcatgtcaatgcgctcgcggaa
ggctttgtcttactggatatctcagccaaaggcgccgaggaaggttggcgatgggtgttg
gaaggcaaagatgagcctactttgttctacgatattgatttgcttcacaagtatcttgac
gctttccccaattcccctatggcatgctttatagaagagtactgccggtggttcaaacgt
cctttgccggaaatggaggaagattcttcaaaaccagaagcacttgaaggggacaagaaa
gtcgaagattcagacaagcagcgaaagcgtcacaagggcgggcgaggtgctttagcaaag
agacaatctcgtcgagcccatctgaagaaaacacatgtgtcagaggatgtggaaaaagag
gaaagagaagagctcttctcttcaatgactaaacttgtcgaccaactcccaatgtccatt
tttgcccatagggtgatggcgagaatcgcacttgaagatgaagattggtccagcgcgata
ggcttcgccgagagggcccgaaagcttcttaccggattggaagctgagagagatatcact
cttaccaacgttcgcgcagaccttgacacagctttgggtgtagcccttgtcccctactac
cctcccaagcaccatgtccgtgctgcgcgcattcttgaaacagtactgaagacccggccg
accaataatgaagctcgttttgcccgtgcgcaaatttacgagactgccggccagtggtct
gatgctcgtcagcactttgagaaaatcgtccaagatggtcttaacgagaagcagagactg
gattcaaaggaagaagtcggttggtgtttggtcaatgaaggaaagctcgaggaaggaaga
gatatgttggaggaggtcatacaagtcagagacactaagacggagaaagagaaagaggca
gaagcaagggagaggggaaggacttggtggagattaggcaagactgaatggatgatcgga
gatgaggaaagtaaacaacatgccgaggaatggtttatggcatctatccgcgcatttcca
gactttgccgcgtcttacacttctcttggagtctgttattcatctgcaacccctcctgat
aatgagcgtgccctcaaatgcttccaacgagcttttgaacttgacgccagagaaaccgac
gcagcttatcgactggcaaatggatacgccgatgaagatgagtgggcaagggtgaggacg
atcgccatgcgcgtgatggaaggcgaggggggtttggagggtgtggcaggaggggaagca
ttgaatcctaaaggaagatttgctccgcaaaatggttgggcttggaaagcactcggctct
accgagatgcattacaaaaagtttgccgaggccgccgcggcctatcagatcgctcttcgg
gccgacgatcaagatgtatccacatggatcatgttaggtgagagttacgtcaaaagcggg
cggcacatggcaggcctcaagacatttgatcatgccttaaccctcaatccccaccactgg
cgcgcttactacaatatcggtcaaacccaaagccagctcggcgctttcgacaaagccatt
gaagcctatcggaaagtcttggaaatcacccagaatgaggatgttggtgtgattgccgct
ttagcggaagcaagtctttctctcggacggcagacaggggcgggaggttttagagagagg
tcaagaggggcatttcatcgagccatcgagttggctatgaaggtgctcaagacgggaaag
acacacaaggcgtggggatggaagcttattggtgacgccacctatgagctgagcggacaa
gaatcgagtcttgaagaggcgcaagactcatttacggttgtacaatccgtgctgactttc
cttgttgaggacgacactgatcgtcggtcaaaagcaccaggcgtcggccatgcagcaaat
ctcctccaggatgctgtctccaccaccacttctctccgggcttcgattttcgctttcgcg
tatcgtgcccatattctcaagaatgagccccgtgttatcgatccagcattgtatgactat
gccagcgccttgcatacactggctagcaaacttgtcgacactgaggagcggaaacaatgt
cttaagaccgctatcagcgccataaggacagcgttagatagaaacgcaggtgatgaaaga
ctttggaatgccttgggcgtgatttgtgcgactgctggtccacaagttgctcaacacgca
tttgtagtgtctctggagctctacagcaaggacccagtcgtttgggtcaacctagggtac
ctgtatctgcgcctggatgatctcgatctcgccagtcaatgcttcctcaaggctcaaatt
attgatcctgattatgcgagggcttggtatggacaaggtctgttggctgatcgtcatggt
gataaagagcatgctaaggcactcttttcgcactccgtgacgctttcagcccaatcgctt
ctagaggctgaccttgctcttgcggcggcgactttcatgcaattcttccgccctaacgct
tctgttgactctggtcttcttcatcaacccgcctttgccctcaagcattactgtcatcag
cgtccgggtgattccactgctgcccatctctatgccctcatatgcgagcgattgggtctt
gtcgaagaagctgcattgtcacttgaaaatgctgctgctgtgttggaagacgaatttgag
cgagccgaatccggggaaatcgaaaacctttattccattgcgctttgcaaccttggtcga
gttcgactttctgctggccagtacttagagtctctcgatgcactcaacaactgctgggag
ctcattgcgtcttcgtctgaaccgagtgcggtttctctaaagccacaatgcaaactcctc
caaggtttggcattctactggcttggacagattgatgagagcctggaggcattccaagca
agtttagatgaagcgatccagaatcaggactacgaagtcaaggagaaggtggcagtgctc
ctgagtagaacgctgtgggggttgggagggaaggatgccaaagagacagcaaaaagtaac
ctcatggaatgtttgtctcgagaaagaccgtctcttgaagtcatctctactctggcagcc
attgcgctcgtatcctccgacgcagatcttactaatgctgctatctccgagctcttcact
cgacctatcgctgagagagtacaagatccttctgggcaggctagtcttgtgctttatctg
cacgcgatctttgaaggtcgagaggaagacgcctacgagatattacagtcagctttccag
gccgcaccgacgtctttaagcgtacgaaaccgcctcgcagaagccctcctcaaggccggc
aaatcaaaggaagcacttgatgtgtttgccgtcaaggatatcaaagaagggacggccgac
gtcaaagccaaggagaaaagattgcttggcatgggggagttgatggaaggagatgcgaag
gggatgaaaacgataattagaagcgtgatgcttgcaccctgggaagatgaaagctggcag
gctttggcctggggaaagaaagtggttgaagaagctggcttggttgaggccaaagaagtg
gcaaaagatgacgccgcaactgagatcaagcttacagagtga

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