KEGG   Cryptococcus decagattii: 89987630
Entry
89987630          CDS       T10966                                 
Symbol
IAS62_000854
Name
(RefSeq) uncharacterized protein
  KO
K14962  COMPASS component SWD2
Organism
cdec  Cryptococcus decagattii
Pathway
cdec03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:cdec00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    89987630 (IAS62_000854)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cdec03019]
    89987630 (IAS62_000854)
   03036 Chromosome and associated proteins [BR:cdec03036]
    89987630 (IAS62_000854)
Messenger RNA biogenesis [BR:cdec03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     89987630 (IAS62_000854)
Chromosome and associated proteins [BR:cdec03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     89987630 (IAS62_000854)
    COMPASS/SET1 complex (yeast)
     89987630 (IAS62_000854)
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_THOC3 WD40 Beta-prop_IFT122_1st WD40_Prp19 WD40_WDHD1_1st Beta-prop_WDR3_1st Beta-prop_EML_2 WD40_CDC20-Fz EIF3I Beta-prop_WDR36-Utp21_2nd WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WD40_Gbeta Beta-prop_WDR3_2nd ANAPC4_WD40 Beta-prop_EIPR1 WD40_MABP1-WDR62_1st Beta-prop_SPT8 Beta-prop_WDR75_1st DSE1_N Beta-prop_WDR36-Utp21_1st Beta-prop_TEP1_C Beta-prop_EML CFAP251_N Beta-prop_NOL10_N Beta-prop_WDR41 Beta-prop_IFT140_1st Beta-prop_RIG_2nd Beta-prop_DCAF4 PAC11 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_SCAP WDR90_beta-prop_4th NBCH_WD40
Other DBs
NCBI-GeneID: 89987630
NCBI-ProteinID: XP_064718806
UniProt: A0ABZ2AQG4
LinkDB
Position
2:complement(join(46941..46997,47047..47586,47640..48030,48097..48269,48348..48461))
AA seq 424 aa
MDTPGAGPSRQSSSNPVANNKLDPNLKPGTVLLTSDLLSSFQPAKRFKDAVLEPTSTPSG
PKTHSVTTLTFDDTGDRFISAGDDNQFILWDARKGKKIKSFYSKKYGIDHVRSTHKTGTI
LHASTQGGDHAVRYHSTHDNAYLAYFKGHTARVRSIDMSPADDSFVTAGDDGTVRLWDLR
ANACKGLVNDVGGSAIAAMDNTGVVFAVACSDTQTIMMYATKTADVQPFIHQGLVDIALE
DISTPPPKPIFTSLHFSNNGQYLLVGTSSDVHYVLDAIYLIPLRRLVGHSGLERDAQGNK
GVEPRRGLSGEELCWTADSNWVISGSANGEVVAWDLRPEPGQSQLTRADVAGGNWHSANP
PDWTTLRIPDLKPTVVLHGDGAGSGPTRAVKFNPRYNLMAVGGHDLTLWMPIKDEEARLA
AEGW
NT seq 1275 nt   +upstreamnt  +downstreamnt
atggatactccaggcgccggcccttctcgtcaatccagctctaaccccgttgcaaacaac
aaacttgatcccaacttgaagcctggaactgtacttctcacctctgatcttctctcctct
ttccaaccagcaaaacgctttaaagatgccgtcttagaacctacttctacaccgtctggg
cccaagacgcatagtgtcacaactcttacattcgatgatacaggagataggtttatcagc
gcgggggatgataaccagtttatcctatgggatgcgaggaagggcaagaaaattaagtca
ttctattctaaaaagtacggtatcgaccatgttcgatcaactcataaaaccggcactatc
cttcacgcttctacacagggaggagatcacgcagtgcgataccactcgacacatgataat
gcgtatcttgcgtacttcaaaggccatactgcgcgtgtacgttcaatcgatatgtcgcct
gcggatgactcgtttgtgactgctggagatgatggaacggtgcggctatgggatctgaga
gcaaatgcgtgtaaagggttggtgaatgatgttggaggctcggcgatagctgcgatggat
aatacgggagtcgtgtttgctgtggcgtgctcggatacacaaacgatcatgatgtacgcc
acgaagactgcagatgtgcaaccattcattcaccaaggtctcgtcgatattgctctggaa
gatatatcgacgcctcctcccaaacccatcttcacttcgttgcacttttcgaataacggc
cagtacctcctcgtcggcacatcttctgacgtacattacgttctcgatgcaatctacctt
attcctctccgacgccttgtcggtcattcaggcttggaacgcgatgcacaaggtaataag
ggtgtcgagccccgacgagggctcagtggtgaagagctttgctggacagccgactccaac
tgggtaatatccgggtctgcgaacggagaagtggtcgcgtgggatctccgtcctgaaccg
gggcagagccagttgacgcgtgcggatgtcgctggcgggaactggcattcagcgaatccg
ccagattggacgactttgaggataccggatttgaagccgacggtagtgctgcatggggat
ggggcagggtctggacccactagggcggttaagtttaacccaaggtataatttgatggcg
gtcggtggacatgacctgacattgtggatgccaataaaggacgaagaggcgagattggcc
gccgagggatggtag

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