Cryptococcus decagattii: 89987677
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Entry
89987677 CDS
T10966
Symbol
IAS62_000902
Name
(RefSeq) uncharacterized protein
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
cdec Cryptococcus decagattii
Pathway
cdec03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cdec00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
89987677 (IAS62_000902)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cdec03021
]
89987677 (IAS62_000902)
Transcription machinery [BR:
cdec03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
89987677 (IAS62_000902)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
DUF6739
Motif
Other DBs
NCBI-GeneID:
89987677
NCBI-ProteinID:
XP_064718853
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Position
2:complement(join(177551..178459,178517..178828,178888..179133,179196..180026))
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AA seq
765 aa
AA seq
DB search
MSDATLFLRKSKDKQRRKNGSGASRIASTSNSSLASRPSALKSQPLAGPSSSGPPSSAAP
SPSYVSVKSEPDGSNNPNITEIKIFSTDSNSALRYNLMRLNSVKDVDPTQITAPIFMNRK
KPGPKEPPTFALDENGKIVGRYVYDAEGRPVLDEDGQPVVERKEIVDMSLVGQAPGGATK
RRVKRGTKEVFHQDIEIMRLRREEALPWVLESGNPQDKPAQPEQWVGRMLEQGQLSTVLL
SNDGTRDGFELMPLGRSYKFEPARPFKPLDSDAANKLFELQAKNKIHDRWAFRPADNQSG
EASSASTPIQVKAEPNELEQRAARMETRIKMLKGVTVDRKVKVERYEDDYKREGHRVERG
MEGGVDEELDFDEAEEFQDDDDNNTFYRDVREEEEARELEERLKKEFRVANANVGDRPQI
DAEDDEDDLFGDKSLDDEGKKLRKIMRRRMRENGEDYDIDEESDSDSDDESVTSAQNKEK
EKEKDKEKERAKERDSSRNPSQPPSRPTSRPPTARTSSPSGSNPRHPSPKKGKASTAPPP
VSGASLIAQRATSRGASPRPSPHGGHVTGRASSPLGRAPSPFEGRGFGVPSQSQPASRAT
SPAVRGSSPPSGGGAATGGASPASGGPSTRDGSPAPPAGRQSPRKENAASSLSAKRKSSP
SVSTPSADAPPRPKKHKKTGSLTPAPAPEDIPPFPGMITKQDVLGWFQRNKKKAVPMNEA
IGAFRKRIVDAGPNRDANQKLFLGWIRMVADQENGNLSLKPEFRQ
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacgccactctgtttctccgcaaaagcaaggacaagcagcgtcgcaagaacggc
tctggcgcctctcgcatcgccagcaccagcaattcatcgttggcatcgcgacccagcgcc
ctaaagagccaacctctcgccggtccatcttcatctggaccaccatcttctgctgctcct
tctccatcatatgtttcagtcaaatcagaaccggatggatcaaacaatcccaatatcaca
gaaatcaaaatcttctccactgattcgaacagcgcattgcgatataatctcatgcgcctc
aactctgttaaggatgtcgatcccacacagataacagcacctatattcatgaacaggaag
aaaccaggcccaaaagaaccccctacttttgctttggacgagaatggtaaaatcgttggg
cgatatgtgtacgatgccgagggtagacccgtcttagacgaggatggccagcccgtggtt
gagaggaaggaaatagtcgatatgtctcttgtggggcaggcacctggcggcgccacgaag
aggagggtaaagaggggcacaaaggaggttttccaccaggatatcgaaattatgcgtctt
cgacgagaggaagctcttccttgggtgttggagagcggtaacccgcaggacaaacctgcc
caaccggaacaatgggtaggaaggatgttagagcaaggacagctctccactgtgcttttg
tcaaatgacgggacacgagatgggttcgagttgatgccactgggcagatcttacaaattt
gaaccggcccgaccttttaagcctctagactccgatgctgccaacaaattgtttgaattg
caagcaaaaaataagattcacgatcgatgggctttccggcctgcagacaaccaaagcggt
gaagcatcttctgcctcgacgcctattcaagtcaaggcggagccgaacgagttagagcag
cgcgcagccaggatggagacaaggattaaaatgctcaagggcgtcactgtcgaccggaag
gtcaaggtggagagatacgaggatgattataagcgcgaagggcatcgagtggagcgtggt
atggagggtggcgtggatgaagagctcgattttgatgaggcagaagaatttcaagatgac
gacgataacaatacgttctaccgcgatgtgcgagaagaggaagaggctagggagttggaa
gaacggctcaaaaaggagttccgtgtggctaatgccaatgtcggtgaccggcctcagatc
gatgcagaggacgatgaagatgatctatttggagacaagtcgcttgatgatgagggcaaa
aagttgaggaagattatgagaaggaggatgagggaaaatggggaggattatgatattgat
gaggagtcggactctgattcggacgatgaatccgtaacaagcgctcagaacaaggagaaa
gaaaaagaaaaggacaaggaaaaggaaagggccaaagaaagagactcttcccgcaaccct
tctcagccgccttcacgtcccacttctcgtccccctaccgctcgcacgtcatcaccctcg
gggtctaatcctcgccaccccagcccgaaaaagggaaaagcctctaccgctccacctcca
gtttctggcgcgtcgttaatcgcccagcgcgctacctcacgaggagctagccctcgtcct
tcccctcatggaggacatgtgacgggtagggccagtagccctctcggaagggcgcccagt
ccctttgaaggtcgtggttttggtgtccccagtcagagtcagcctgcgtcaagggctact
agtcctgccgtcagaggaagcagtcccccctcaggaggtggtgcagccaccggaggagcc
agtcctgcctctggagggccatcaacgagggacggatcccccgcccctcctgctggtaga
cagtcccccagaaaggaaaacgctgcatcatctttgtctgcaaagcgcaagtcgtcacct
tccgtttctactccttccgccgatgcacctccacgaccgaaaaagcacaagaagactggt
tcccttaccccagcaccggcaccggaggacattcctccgttccctggtatgattaccaag
caggacgtcttgggttggttccagagaaacaaaaagaaggctgttccaatgaatgaggcg
attggggcattcaggaaaaggattgtggatgctgggcctaatagggatgccaaccagaag
ttgttcttggggtggatcagaatggtggctgatcaggagaacgggaacttgagtttgaag
cccgaatttagacagtag
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