Cryptococcus decagattii: 89988147
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Entry
89988147 CDS
T10966
Symbol
IAS62_001372
Name
(RefSeq) uncharacterized protein
KO
K15323
tRNA-splicing endonuclease subunit Sen34 [EC:
4.6.1.16
]
Organism
cdec Cryptococcus decagattii
Brite
KEGG Orthology (KO) [BR:
cdec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cdec03016
]
89988147 (IAS62_001372)
Enzymes [BR:
cdec01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
89988147 (IAS62_001372)
Transfer RNA biogenesis [BR:
cdec03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
89988147 (IAS62_001372)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSEN34_N
tRNA_int_endo
TAF4
Motif
Other DBs
NCBI-GeneID:
89988147
NCBI-ProteinID:
XP_064719322
UniProt:
A0ABZ2ANZ4
LinkDB
All DBs
Position
2:join(1407308..1407377,1407432..1407569,1407655..1408457)
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AA seq
336 aa
AA seq
DB search
MSSPPHSIPLYLINGVATVWDAQTAATLHCVHNISGLRAGTLPGVAQQNGFLGLPLTLMQ
EETAYLVTQGIAHLVPLDPSPSPPSAETIKAHTAARIARLKALEERTREAEAKRQEESKK
AFDKGGEKARLKREARARAKAEKAKANGEGLFAEDDKENTITAAPVMASSPAKTKVKIKE
TGGAPAPGHFHIIPSHPVLSQHPSGSSRSQSQSITSLPHPLFPFPTTPRQRALLGVFAAL
QSLSYRVGLGPRFGGEWLIYPGDYLRYHAHFTSQVIVRDEPIKPTEIVAWGRLGTGTKKA
GLICCWDDGKRQDGQDNQEGKEENVEFYSLEWANFG
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgtcctctcccccccactccatccccctctacctcataaatggcgttgccaccgtctgg
gatgcacaaactgctgcgacactccattgtgtgcacaatatctccggtttaagagcgggg
acactgcctggcgtagcccagcaaaatggatttttgggattgcccctgacattgatgcag
gaagagacagcataccttgttacccaaggcatcgcccatctcgttccccttgaccccagc
ccatctccgccttccgccgaaactattaaagctcatacagcagcgcgtatcgcgcgtctg
aaagcgttggaggaaagaacaagagaggcggaagccaagaggcaggaagaatctaaaaag
gctttcgataaaggcggtgaaaaagcgagactgaaacgggaggcgagggcgagagcgaaa
gcagaaaaggcaaaagcaaatggggaaggactgtttgcggaggatgataaggagaatacc
atcactgctgcacccgtaatggcttcttcaccggcaaagaccaaggtgaaaatcaaggag
actggcggcgcgcctgctcctggccactttcacattattccctcgcatccagtattgtct
caacatccatccggatcatctcgctcacaatcacaatctataacatccctcccccaccct
ctcttcccgtttccaacaacccctcgccaacgtgctcttctcggcgtgttcgctgcgctt
caatcactttcataccgagtcggactcggtccccgatttggtggagaatggttaatttat
ccaggagattacttgcggtatcatgcgcattttaccagccaggtcatcgttcgagatgaa
cctatcaaaccgacagagattgtggcgtggggtaggttgggtacaggcacgaaaaaagca
ggattgatatgttgctgggatgatggaaaaagacaagacggacaggataaccaagaggga
aaggaagagaatgtagaattttactcgcttgaatgggccaactttggatag
DBGET
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