Cryptococcus decagattii: 89988263
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Entry
89988263 CDS
T10966
Symbol
IAS62_001488
Name
(RefSeq) ATP-dependent RNA helicase FAL1
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
cdec Cryptococcus decagattii
Pathway
cdec03013
Nucleocytoplasmic transport
cdec03015
mRNA surveillance pathway
cdec03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cdec00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
89988263 (IAS62_001488)
09122 Translation
03013 Nucleocytoplasmic transport
89988263 (IAS62_001488)
03015 mRNA surveillance pathway
89988263 (IAS62_001488)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cdec03019
]
89988263 (IAS62_001488)
03041 Spliceosome [BR:
cdec03041
]
89988263 (IAS62_001488)
03009 Ribosome biogenesis [BR:
cdec03009
]
89988263 (IAS62_001488)
03012 Translation factors [BR:
cdec03012
]
89988263 (IAS62_001488)
Enzymes [BR:
cdec01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
89988263 (IAS62_001488)
Messenger RNA biogenesis [BR:
cdec03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
89988263 (IAS62_001488)
mRNA cycle factors
Stress granule specific factors
89988263 (IAS62_001488)
Spliceosome [BR:
cdec03041
]
Complex C
Other components
EJC/TREX
89988263 (IAS62_001488)
Ribosome biogenesis [BR:
cdec03009
]
Eukaryotic type
90S particles
Helicases
89988263 (IAS62_001488)
Translation factors [BR:
cdec03012
]
Eukaryotic type
Initiation factors
eIF-4
89988263 (IAS62_001488)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Gp6_2nd
Motif
Other DBs
NCBI-GeneID:
89988263
NCBI-ProteinID:
XP_064719435
UniProt:
A0ABZ2ANU2
LinkDB
All DBs
Position
2:join(1709224..1709240,1709287..1709332,1709416..1709425,1709481..1709908,1709956..1710392,1710453..1710664,1710720..1710760)
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AA seq
396 aa
AA seq
DB search
MAGINVGDDKLIFESSEAVTVAPTFEALNLKEDLLRGIYAYNFEKPSAIQQRAIIPIIRG
RDVIAQAQSGTGKTATFSISMLQSIDTNLRETQALVLSPTRELAVQIQTVVLALGDYMNV
SCHACIGGTSVGEDIRKLEAGQQVVSGTPGRVFDMIRRRNLRTKDIKMLILDESDELLNK
GFKDQIYDIYRYLPPATQVVVVSATLPHDVLEMTTKFMTDPVRILVKRDELTLEGIKQFF
VAVEKEDWKFDTLCDLYDTLTITQAVIFCNTRRKVDWLTEKMREANFTVSSMHGEMVQKE
RDAIMAEFRGGQSRVLITTDVWARGIDVQQVSLVINYDLPTSRENYLHRIGRSGRFGRKG
VAINFVTVDDVRILRDIEQYYSTQIDEMPMNVAELT
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atggctggtatcaacgttggcgacgacaagctcatattcgagtcttccgaagccgtcacg
gtcgctcccacattcgaagctctcaacttgaaagaagatctcttgcgcggtatctacgct
tacaacttcgagaaaccttccgccatccagcaacgtgcgatcatccccatcatccgtggc
cgcgatgtcattgcccaggcccaatctggtaccggtaaaaccgccacgttttctatctca
atgcttcagtcgatcgacaccaacttgcgtgagacccaagccttggtcctctccccgacc
agagaattggctgtgcagatccaaaccgttgtcctcgctctcggtgattacatgaacgtc
tcttgccatgcttgtatcggaggaaccagcgttggcgaagatattaggaagcttgaggcc
gggcaacaggttgtcagtggtactcctggccgagtgtttgacatgatccgaaggagaaac
ttgaggaccaaggacattaagatgcttattcttgatgaatctgacgaactgctaaacaag
ggtttcaaggaccaaatttacgacatctaccgataccttcctcccgccacccaggtcgtt
gttgtctccgctaccctccctcatgatgtcctcgaaatgactaccaagttcatgaccgat
cctgtccgaatcctcgtaaagcgtgatgaattgactcttgaaggaatcaagcaattcttc
gtcgctgtcgaaaaggaagactggaagtttgacacgctttgtgatttgtatgacactttg
actattacgcaagcggtcattttctgtaacacccgacgcaaggtcgactggttgacagaa
aagatgcgagaggcgaactttactgtcagtagtatgcacggagaaatggtgcaaaaggaa
cgagatgcgatcatggccgaattccgaggtggacagagtcgagtattgattaccacagac
gtctgggcacgaggtatcgacgtccagcaagtttctttagtcattaattatgacctccct
acttctcgtgaaaactatttgcaccgaataggtcgaagtggtcgattcggcaggaaaggt
gtggcgatcaacttcgtcaccgtcgatgatgtcaggattttgagagatattgagcagtat
tactcaactcaaatcgacgaaatgcctatgaatgttgcggagctcacataa
DBGET
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