Cryptococcus decagattii: 89988284
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Entry
89988284 CDS
T10966
Symbol
IAS62_001509
Name
(RefSeq) uncharacterized protein
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
cdec Cryptococcus decagattii
Pathway
cdec03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cdec00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
89988284 (IAS62_001509)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cdec03021
]
89988284 (IAS62_001509)
03019 Messenger RNA biogenesis [BR:
cdec03019
]
89988284 (IAS62_001509)
Transcription machinery [BR:
cdec03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
89988284 (IAS62_001509)
Messenger RNA biogenesis [BR:
cdec03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
89988284 (IAS62_001509)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH_4
zf-CCCH
Torus
zf-CCCH_2
zf_CCCH_4
zf-CCCH_3
zf-CCCH_9
Motif
Other DBs
NCBI-GeneID:
89988284
NCBI-ProteinID:
XP_064719456
LinkDB
All DBs
Position
2:join(1776393..1776822,1776876..1776965,1777024..1777083,1777134..1778578)
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AA seq
674 aa
AA seq
DB search
MSVPLPSPSPPSSAQDGPISSTGDNSNMSASAKPIPRSRPAPVATAGSPEKTSGTPASYK
YRPGAATSIGKSFNNDNWRDRSPAPTSAMPATFSGKGPERTVGFEKRDVSSLKSNGGSAL
SREREKEENKEKESEKDKEGKEKSALGHVPCRFFKAGACTAGESCPFSHAAPDSAKREVC
QWFLKGNCKFGHKCALAHVRPGEPMSMDRKNKKAAQLEARERSGEVTTSGTRKATPTAIP
SALEESGASPVPIRSALSSSIQSNPTRIGSSPMREPFGPPSGALPNSPPNGFAHSYTRGH
PAFASSPNRPSPLSASFGAVGSGLAAGSVPGPFSLKQGSNLLSSLRPPVSATPTFSSSFS
HSSLAIERPSNAVATPLSASFAGEAPALHRSIWARSDQPAEPLSPRRPIPRTIKPEAVFE
DDDDHGEEFLPSSLSDLLTPQERARRMSHRDSQDSSYSPSLAGYAAQAPIWGGERLAQSA
GPTMGQKGFLQSLWSADGEDVRKFQPTQPSSAQPQKQDFAFGPATAQASGPRTSLLTQQR
SPDSASPTSPVRLSSFNPSAVGPGEPFLIRNLGDPGSPSARALIEHAPGQSLPGGLANAL
SRLHLHGPRSTSSLAAVNSGSGRGVGGLGAEWRLAEHEAEGSEDGDGGLTPPNGLGALHS
KREEHDEGLFAMDG
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgtcggttccgctcccttccccttctcctccctcgtctgctcaggatggccctataagt
agcacaggcgacaattccaacatgtctgcttctgcaaagcctatcccccgctcacggccc
gctcctgttgccaccgccggttcgcctgaaaagactagcggtactcctgcttcatacaag
tatcgacctggcgcagcgacttcgattggcaagtccttcaataacgacaactggcgcgat
cgatcgcccgcacctacttctgccatgcccgctactttcagtgggaagggccctgagagg
acagtgggatttgaaaagagggatgttagctctttgaagagtaacggaggtagcgcgctg
agtagagagagagaaaaagaggagaacaaggaaaaggaaagcgagaaggacaaggagggc
aaggagaaatctgccttgggccatgttccatgtcgatttttcaaggctggcgcttgtact
gctggagaaagttgtccattctctcacgctgctccggattccgcaaagcgagaggtatgc
cagtggttcctgaagggcaactgcaaatttggacacaagtgtgctcttgcccatgttcga
cctggcgagccgatgtcaatggatcgaaaaaacaagaaagcagcgcagctcgaggcgcga
gaacgaagtggtgaggtaactaccagcgggaccaggaaagccactcccactgctatcccc
agtgctcttgaagagtctggcgccagccctgtccctatccgatccgctctttcctcctca
atccaatcgaatcctactcgtattggatcttctcccatgcgagagccttttggtcctccc
tctggggctttgccgaacagtcctcctaatggctttgcgcactcttacactcgaggtcat
ccggcatttgcttcttcacccaaccggccttctcctctttctgcaagttttggtgctgta
ggcagtggactagctgccgggagcgttcctgggccgttctccctcaagcagggttcaaac
cttctttcctctcttcgaccaccggtctctgctactcccacattctcctcttcattctct
cattcatcgctggctattgagcgtccctccaacgctgttgctacacctctttccgcgtct
tttgctggagaagctccagcgttgcaccgctccatttgggctcgttccgaccaacctgct
gagcctctgtctcctcgtcgaccgatcccgcgaacaatcaaacccgaagccgtgtttgaa
gatgatgatgaccacggagaagagttccttccttcttctctgtcagacctactcacccct
caagaacgggcccgccgtatgtctcaccgagacagtcaagactcttcatactctccttcc
ctcgctggatacgcagctcaagctcccatatggggaggcgagcgtcttgcacagagtgca
ggccctaccatgggacaaaagggattcttgcagtctctctggtctgcagatggtgaagat
gtccgcaaattccaacctacccaaccctccagtgcccagccgcaaaagcaagactttgcc
tttggtcccgctaccgcccaagcttccggtcctcgcacttcgttgctcacccaacaacga
tctcccgactccgcctccccaactagtcctgtccgattatcttccttcaacccctctgcg
gttggtcctggtgagccattcttgatccgtaacctcggcgatccgggatccccttccgcc
cgcgcactgatcgaacatgctcccggtcaatccttacctggcggtctggctaatgccttg
tcgaggctacacctccacgggccccgatcgactagctcgttggcggcagtcaattccggg
agcgggaggggggttggggggctcggtgcagagtggaggttggctgagcatgaggcggaa
ggaagtgaagatggtgatggaggtttaacgccgcctaatggcctgggggcattgcattcc
aagagggaagaacatgatgaggggctgtttgcgatggacggataa
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integrated database retrieval system
