Cryptococcus decagattii: 89988352
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Entry
89988352 CDS
T10966
Symbol
IAS62_001577
Name
(RefSeq) uncharacterized protein
KO
K12586
exosome complex component RRP43
Organism
cdec Cryptococcus decagattii
Pathway
cdec03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cdec00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
89988352 (IAS62_001577)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cdec03019
]
89988352 (IAS62_001577)
Messenger RNA biogenesis [BR:
cdec03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
89988352 (IAS62_001577)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
89988352
NCBI-ProteinID:
XP_064719524
UniProt:
A0ABZ2APV8
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All DBs
Position
3:complement(join(8693..8924,9077..9197,9287..9429,9539..9644,9788..10124))
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AA seq
312 aa
AA seq
DB search
MSTETATAGTTGVGGANAAAVFKRLHPVSYLLRFLSSGYRPDGRPIVSSSSSLPTASASA
ADDIWREVSINAGSISTAHGSALVRMGDTTMVCGVKAEIGEPDTETPGEGFVVPNIDLPA
LSSPRFKPGPPGDEAQTYSNWLNELLVSSKTIPLSSLLIAPGKAAWVLYIDVVCINYDGN
AFDAAVLAVMAALRNTRLPKAIYDDDTQRTICSRTERYPLKLGRMPLSCSFGIFESTYLL
PDPTSFETPLLPTTLTIALDQDGQAALVRQEGLGGLRKGGGGKNGKEVVDEAWGLSERRV
EVLRRALDEAEA
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgtctacagaaacagcaacagcgggaacaactggtgtaggaggtgcaaacgcagcggca
gtcttcaagcgtcttcatccggtttcttatctcttgaggttcttgagttcgggctacagg
cctgatgggagacctatcgtttcttcctcctcttccctgcccaccgcatctgcctctgct
gcggacgacatatggagagaagttagtatcaacgcgggttctatatccaccgcccacggt
tcggcgcttgtgaggatgggggatacgacgatggtttgtggtgtaaaagctgagattggg
gagcctgatacggagacgccaggggaggggtttgtagtaccaaatatcgacctcccagca
ctgagttcaccaagattcaaacccggtccacctggcgatgaggcgcaaacgtactcaaat
tggttaaacgagttgcttgtttcatcaaagacaatccctctgtcatcactacttatcgcg
ccaggcaaagccgcttgggtactttatatcgatgtagtgtgcataaactatgatgggaat
gcgtttgatgcggctgttttggctgtgatggctgctcttaggaatacgagattaccgaaa
gcgatatacgacgatgacactcagcggacgatttgttcgaggacggaaaggtacccgttg
aagttggggaggatgcctctgtcgtgttcgtttgggatttttgaaagcacctacctcctc
cccgacccaacgtcgttcgaaaccccattgttacccaccaccctcaccatcgctttggat
caagatggacaagcggcgctcgttcggcaagaaggtcttggtggtttgagaaagggagga
ggagggaagaatgggaaagaggtggtggacgaagcgtgggggttgagtgagaggcgggta
gaggttttgagaagggcattggatgaagctgaggcgtag
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