Cryptococcus decagattii: 89988396
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Entry
89988396 CDS
T10966
Symbol
IAS62_001622
Name
(RefSeq) ATP-dependent RNA helicase ded1
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
cdec Cryptococcus decagattii
Brite
KEGG Orthology (KO) [BR:
cdec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cdec03019
]
89988396 (IAS62_001622)
03041 Spliceosome [BR:
cdec03041
]
89988396 (IAS62_001622)
03036 Chromosome and associated proteins [BR:
cdec03036
]
89988396 (IAS62_001622)
Enzymes [BR:
cdec01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
89988396 (IAS62_001622)
Messenger RNA biogenesis [BR:
cdec03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
89988396 (IAS62_001622)
mRNA cycle factors
Common to processing body (P body) and stress granule
89988396 (IAS62_001622)
Spliceosome [BR:
cdec03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
89988396 (IAS62_001622)
Chromosome and associated proteins [BR:
cdec03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
89988396 (IAS62_001622)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Motif
Other DBs
NCBI-GeneID:
89988396
NCBI-ProteinID:
XP_064719567
UniProt:
A0ABZ2AT05
LinkDB
All DBs
Position
3:complement(join(109743..111257,111314..111675,111727..111766))
Genome browser
AA seq
638 aa
AA seq
DB search
MAATDVNGLASQMNSVNLNGAAQKPQKPAYVPPHLRNRAAPPAAPPPAAPAAYRPSPTGL
PTPVTTPPTRHSVPAALSEDDIGGWGAQPRVRKTFEHGAPPGFGSWKNGQHVVGARNMRM
EKEMYGEVGDGLHQSTGINFDKYADIPVEVSGKGVPEPVTEFTNPPINPVLLENVKYARY
TTPTPVQKYSIPIVADGRDLMACAQTGSGKTGGFLFPILSALFTYGPSAPPVEQDTGYGY
RRTKKVYPTALVLAPTRELVSQIHEEARKFAYRSWVRPAVVYGGADIGSQMRALDRGCDL
LSATPGRLVDLIERGKISLANVKYLVLDEADRMLDMGFEPQIRRIVDEEDMPGVLDRQTL
MFSATFPREIQNLARCFLKEYIFLTVGRVGSTSENITQRVEYVDDQDKRSLLLDLLLAEQ
SGGLILVFVETKRMADTLCDFLCSRRHNATSIHGDRTQREREAALYAFKSGRAPILVATA
VAARGLDIPNVTHVILYDLPNDVAEYTHRIGRTGRAGNVGTSTAFFNRGNSNIGKDLIEL
LKEANQEVPQWLVEISSERSYGGGGGGYRGGRGRSTGGGGGRMGGRDMRQGGGGGGYGGG
GYGGGARTGGGYGGGGGASWGNGGGFPPAGGDSGASWW
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atggccgctaccgatgtcaatggactcgcgtcccaaatgaactccgttaaccttaacggt
gccgctcagaagcctcagaaacctgcctacgtccctcctcacttgaggaaccgtgccgct
cctcccgccgctccccctcctgcggcccccgcagcctacagaccctctcccaccggtctc
cccacccctgtcaccaccccacccaccaggcatagcgttcctgccgccctttccgaggac
gacatcggtggatggggtgctcaacctcgcgttagaaaaacttttgagcatggtgctccc
cccggatttggcagctggaagaatggccagcacgttgttggtgccaggaacatgaggatg
gaaaaggagatgtatggtgaagtgggagacggattgcaccagtccaccggtatcaacttt
gacaagtacgccgatatccccgtcgaggtcagcggtaagggcgttcccgagcctgtgact
gaatttaccaacccccctatcaaccccgtccttcttgagaacgtcaagtacgctcgatac
accacccctacccctgtccaaaagtactccattcctatcgttgccgatggccgtgatctc
atggcttgtgcccagaccggttccggtaagactggtggtttccttttccccatcctttca
gctcttttcacctatggtccttctgctcctcccgttgagcaggacactggctacggctac
aggaggacaaagaaggtttatcccacggcccttgttcttgcccctacccgagaacttgtg
tctcagattcacgaagaagctcgtaaatttgcctaccgatcttgggtccgacctgccgtc
gtttacggtggtgccgacattggttcccaaatgcgtgccctcgaccgaggatgtgacctt
ctttccgccacccctggtcgtcttgtcgacttgattgagcgaggcaagatcagtcttgcc
aacgtcaagtacctcgttcttgacgaagccgaccgaatgctcgacatgggtttcgagcct
cagattaggagaatcgttgatgaggaagacatgcccggtgtcctcgaccgtcagactctc
atgttctccgccaccttccctcgagagattcagaaccttgctcgatgtttcctcaaggag
tacatcttcttgactgttggccgagttggttctacttccgaaaacattacccagcgtgtc
gagtatgtcgacgaccaggacaagcgctctttgcttctcgatttgctccttgccgaacag
tctggcggtttgatcctcgtctttgtcgagaccaagcgtatggccgacactctttgtgac
ttcctctgctctcgtcgacacaatgccacttctatccacggtgaccgtacacagcgtgag
cgtgaagccgctctctacgcattcaagtccggtcgtgcccccattctcgttgctaccgcc
gtcgccgctcgaggcctcgatatccccaacgtcactcacgtcatcctctacgatctcccg
aacgacgttgccgagtacactcaccgtatcggtcgaactggtcgtgcaggaaacgtaggt
acttctactgccttcttcaaccgaggaaacagcaacattggtaaagatttgattgagctc
ctcaaagaggcgaaccaagaagttcctcaatggcttgttgagatctcctccgagaggagt
tacggtggtggcggtggtgggtacagaggaggtcggggacgaagcactggtggtggcggt
gggaggatgggcggacgagatatgcgtcaaggtggtggtggtggcggttatgggggcggt
gggtatggcggtggtgcaaggactggtgggggttacggaggtggtggtggtgcctcgtgg
ggtaatggcggtggtttcccacctgccggcggcgactctggcgcgagctggtggtaa
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