KEGG   Cryptococcus decagattii: 89988412
Entry
89988412          CDS       T10966                                 
Symbol
IAS62_001638
Name
(RefSeq) uncharacterized protein
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
cdec  Cryptococcus decagattii
Pathway
cdec03020  RNA polymerase
cdec03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cdec00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    89988412 (IAS62_001638)
  09124 Replication and repair
   03420 Nucleotide excision repair
    89988412 (IAS62_001638)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cdec03021]
    89988412 (IAS62_001638)
   03400 DNA repair and recombination proteins [BR:cdec03400]
    89988412 (IAS62_001638)
Transcription machinery [BR:cdec03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     89988412 (IAS62_001638)
  RNA polymerase III system
   RNA polymerase III
     89988412 (IAS62_001638)
  RNA polymerase I system
   RNA polymerase I
     89988412 (IAS62_001638)
DNA repair and recombination proteins [BR:cdec03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      89988412 (IAS62_001638)
SSDB
Motif
Pfam: RNA_pol_Rpb5_C RNA_pol_Rpb5_N NA-iREase1 Mrr_cat
Other DBs
NCBI-GeneID: 89988412
NCBI-ProteinID: XP_064719583
UniProt: A0ABZ2AQ21
LinkDB
Position
3:complement(join(156803..156830,156888..157004,157077..157216,157287..157368,157429..157533,157625..157704,157787..157864))
AA seq 209 aa
MSHEANRELARLWRVSRTVHEMVRDRGYLLADYEINVSFEEFKDRHGATGSVDRSNMSFD
AIHESDSTDKIFVYFCADKNVSKASMKTFIGSMDKMGARRGIIIWSEKMSPAAKKTLQEM
QSEYYLEDFPESDLLVNITKHFLVPKHTIMKPEEKSALIKRYRLKETQLPRIMVTDPVAK
YYGLKRGQVMKIERASETAGRYITYRICM
NT seq 630 nt   +upstreamnt  +downstreamnt
atgtcccacgaagcgaaccgagaattagctagattatggcgtgtttcccgaactgtccat
gagatggttagagatcgaggatacttgcttgctgattatgagatcaacgtttcgtttgaa
gagttcaaggacagacatggtgcgactggatctgtcgaccgttccaacatgagttttgat
gctattcatgaaagcgacagcaccgacaagatctttgtgtacttttgcgcggacaagaat
gttagcaaggcttctatgaagacctttataggttctatggacaagatgggtgctaggcga
ggaatcattatctggagtgaaaagatgtcaccggcggccaaaaagacattacaagaaatg
cagtctgaatactatctcgaagacttccctgaatctgaccttctcgttaacatcaccaaa
cacttccttgtccctaagcacactatcatgaagcccgaagaaaaatctgctcttatcaag
cgataccgattgaaagagactcagttaccacgtatcatggtcacggaccctgtggccaag
tactacggcttgaagcggggacaggttatgaagattgaacgagcgagtgagactgctggg
cggtacattacctaccgcatttgcatgtag

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