Cryptococcus decagattii: 89988467
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Entry
89988467 CDS
T10966
Symbol
IAS62_001693
Name
(RefSeq) uncharacterized protein
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
cdec Cryptococcus decagattii
Pathway
cdec03082
ATP-dependent chromatin remodeling
cdec03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
cdec00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
89988467 (IAS62_001693)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
89988467 (IAS62_001693)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cdec01009
]
89988467 (IAS62_001693)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cdec03021
]
89988467 (IAS62_001693)
03036 Chromosome and associated proteins [BR:
cdec03036
]
89988467 (IAS62_001693)
Protein phosphatases and associated proteins [BR:
cdec01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
89988467 (IAS62_001693)
Transcription machinery [BR:
cdec03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
89988467 (IAS62_001693)
SWI/SNF complex
89988467 (IAS62_001693)
Chromosome and associated proteins [BR:
cdec03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
89988467 (IAS62_001693)
PBAF complex
89988467 (IAS62_001693)
SWI/SNF complex
89988467 (IAS62_001693)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF5
Motif
Other DBs
NCBI-GeneID:
89988467
NCBI-ProteinID:
XP_064719637
LinkDB
All DBs
Position
3:join(305059..308273,308327..308442,308490..309039,309088..310249,310299..310435,310490..310604)
Genome browser
AA seq
1764 aa
AA seq
DB search
MAQQNQPRFRPPFPGQPGMNPQQLAMLQQMSQAAQAQAGQPSQGQGRPSLTSQQIQMAMA
SMQAQAQAQGFNMANMNPQALIQAMRNQQLNQNQQQGMQTGSQVGQGQGGQAQLGQQNQQ
QGQQPQAQNLAGSYQPSQPHPNPAQLAFQQQRIAQLMQAQGMQARPGGPGSPIRPPQQFP
QQQQPQQRAGSMPPPPVPGQQPQQQQQQNSPFPPQQPNLQSTPQPMQLSLSPAQQQMLTQ
QRQTLLSNPQFQSMPPQQQHIILQQQQNQYLRMIAMQQAANQQQGGQHSLQGQTQPSSQQ
PQQHSSQGRPGSSQGVSQSPVIHRQPTPQLGGTSQQSPLSSLPQHMAPPRPGSAASQRPV
TPQTGPIGPGSPAIRTPPAGGMFQQPPQHMSHSGNAPSPTLSTHSHHSQQHHTPQQGPTM
ASPMLPRMDGGGTPQSGQGQGSGVNGEPQGFPLQQSQPGQQGSVQDPNNIGTPYRSFRLP
GQLDARAFPTLPTNYTPEQQQQVASALTLMSRAVQGQGQGQGQNQNQNQGPEGQQQGQGQ
LPQPPQMQPAVRPGPGSVQAPGIPGPNSNMPRPPPVPLDIDTSDFPFDPRILQYLPYVGD
ARWRTQVQAQNPGLFAAVQHAAGMWQTIRPEVMQRMQSAFVAMKNAALRGTQQGAPIQSG
QPAQQGQQPSLGQQQGLVQAPQQQQQQQQQQQQQQQQLQQQQLQQQQQQQQQQQQQQLQQ
QQLQQQQQLQQQQQQQQQQQQQQQQQQQQQQQQQQQPQPQPQPQPQQQQQPAQTSAAQLG
SEQLAQQAWTQQQAAQAQAQMGAQAQARMHAQESPVPGSNISPPIRPPSTPHVVPSPSSP
IGRRPSSSSMKDIKRDRTPSGSGSVGQTSMPPPNFIPSHNGKPPSALGGSLEQVVTATPP
SAGAGSTSIPAAATSTPTAPADVPTPMPAMAPASTRRSLSGPSLPIKEWATALHLDIPVT
KISPLPVNSIDEAIDPTFDGKLPPLSEKEKVNIRKWLDNDVAFVAQKKERQPRVLGKMKR
WAEEDDRGTEWWMLRKSEKRVMPQTKLRVLWPSDKERMRAQRTHKGRRQVKFSQSDLKKM
AEVEDHIVPVRLELEHEGQKLKDTFMWNCSDTVVTPELFAHILCDDFAVPHQHFASRIVA
AIEERVREYKDQVLPLLESRSKGDCQGKLDPDGDDEARAMCEVFRKAREGSGIDDEIKTD
PGEEDGADHIRIVTFDDQVNGVDLDDERPWTVEEAMTLVPKELSHDLRILIKVDIIIGTQ
NLTDSFEWDLHSSVTPEEFAASYVTELGLSMEFATAIAHDIREQIIIYQRSLFLVGHTDS
SSVILDDEVRGAFLPPVTTTLRKEDIAMASYTPIFSELGPDQLALLESQREKEMKRKKRA
GRARRGIVLPEREPIKTQRTLLNNLGPNGVPILFQTDNVPVRDSAPTSRRRGAALAAEAN
INLLAQDLPIPASGSPAPHLPHMSARGKRLGRPPKNRAISPVSIREEPLANGGTPITGDI
KGRRGYLDESVDELSINGALTASGRKKAGHHNRIPDSPSEPSTPLSGKVETLPSLIRLES
QTDQTSILTKRKSNNDVDERPLKSAKPDEVGAPFAISKFPSDNKIQKKKRSSDSSGSDSD
SDSGSDSGSDDSDSTFGGRKERKKAPVGRTETPAARSSVVPAETPGLAMTASPGSGRKAI
EVPMWIQRALSNMRAKYARDSFLVIQKPRPADQPDAPPEWRAKCNDCPGRIYALGPGETL
NNFEVHLKNKGHIGNRLAREGKTQ
NT seq
5295 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagcagaaccaaccgcgctttcgtccaccgtttcccggccagcccggtatgaat
cctcaacagctagccatgctccagcaaatgtctcaagcagctcaagctcaagctgggcaa
ccgagtcaaggccagggtcggccgtcgctcacctcccagcaaatacaaatggcgatggcc
agtatgcaggcgcaagctcaggcgcaaggattcaacatggcgaatatgaatccccaggcc
ctgatacaggcgatgagaaatcagcagctgaatcagaaccaacagcaaggaatgcaaacg
ggatcgcaggtgggacaggggcagggtggccaagcgcagctggggcagcaaaatcagcag
cagggccaacaacctcaagctcaaaatttggcagggtcatatcaaccaagtcaaccacat
ccaaaccccgcacaactagcatttcagcaacagcggatagcccagttgatgcaggcgcaa
gggatgcaggctagacccggtggtccaggatcgcctatacggccgcctcaacagtttccc
cagcagcagcaacctcaacaacgtgcgggttcaatgcctcctccccctgttcctgggcag
caaccacaacagcaacaacaacagaactcgccgtttccacctcaacaaccaaatctgcaa
tccactcctcaacccatgcaattatccctctcacctgcgcagcaacaaatgctcacccaa
caacgccaaaccctgctgagtaacccccaatttcagtcaatgccgcctcaacaacagcac
ataatcctacaacaacaacaaaatcaatatctgaggatgatcgcgatgcagcaggctgcc
aatcaacagcaaggtggacaacattcgctccaaggtcagactcagccgtcctcacaacaa
cctcagcagcactcctcccaaggccgacccggttcatctcaaggtgtatcccagagccct
gtcatccaccgccaacctacccctcaattaggaggtacatcgcaacagtcccctttatca
agtctgccccaacatatggcaccaccgagaccagggtcagcagcgtcccaaagacctgtc
acacctcaaactggaccgattggaccagggtcaccagctataagaacacctccagcaggt
ggaatgtttcagcaaccgcctcaacatatgtcgcacagcggcaatgcaccttcacccaca
ttatcaacacattcacatcatagccaacaacatcacacaccgcaacaaggtccgacgatg
gcgtcacccatgctcccgaggatggacggtgggggtacgccccagtctggtcaaggacaa
gggtcaggggtgaacggtgagccccaaggctttccactgcagcagagtcaacctggtcaa
caaggttcagtacaggaccccaataatattgggacgccatacagatcgttcagactaccg
ggccagctggatgcccgtgctttcccgacgttgccgacgaattatacgcctgaacagcaa
cagcaggtggcttcagctctcactctgatgagtcgggcagttcaaggccaagggcagggg
caaggtcaaaatcaaaatcaaaatcaagggcctgaaggtcagcaacaagggcaaggtcaa
cttccccaaccgcctcagatgcaaccagcggttcgccctggtcctggctcagtccaagct
ccggggattccaggtccaaattccaatatgccccgccctccaccagttcccctcgacatc
gacacttctgattttccatttgacccgcgtatcctccaatatcttccttacgttggcgac
gctcggtggcgtacacaggtccaggcccagaacccaggattgtttgcggcggtacagcat
gcagcaggaatgtggcagactataagaccggaagtgatgcagagaatgcaatcggcgttt
gttgccatgaagaatgccgcgcttagagggacacaacaaggggctccaatacagtctggc
cagccagctcagcagggtcagcaaccgtcgttaggacagcagcaaggattggtacaggcg
ccgcagcagcagcagcaacaacaacaacaacaacaacaacaacaacaacaactgcaacag
caacaactgcaacaacaacaacaacaacaacaacaacaacaacaacaacaactgcaacaa
caacaactgcaacaacaacaacaactgcaacagcagcaacagcaacagcagcagcagcaa
cagcaacagcaacagcaacagcaacagcaacagcaacagcaacagcaacctcaaccgcaa
ccgcaaccgcaaccgcaacaacagcagcagcccgcacaaacatcagctgcccagttgggg
tcggagcagttggcccagcaggcatggactcaacaacaagctgctcaagctcaggctcaa
atgggagcccaagctcaagcccgaatgcatgcacaagagtctccagtgccaggaagcaat
atatcccctcccattcggcccccttccacaccccatgtcgtgccttctcccagctctcct
atcggccgccgaccatcaagttcaagtatgaaggatatcaagcgagatcgcacgccttct
ggtagtggatcggttggtcagacttcgatgccgccgcctaactttataccttcacataat
ggaaagccgccgtccgcattgggaggatcattggagcaagtcgttactgctactcccccc
agcgctggtgcgggttctacctcaatcccagcagctgctacctctacccccactgctcct
gcagacgttcctacgcccatgcccgcaatggcacccgcatccacccgacgatccttatct
ggtcccagtctacccatcaaagaatgggccaccgcccttcatctcgatatcccagtcacc
aagattagccctctccctgtcaactctattgatgaagctatcgatccaacgtttgatggc
aaactgcctccattgtcagagaaggagaaggtcaacattagaaaatggctcgacaacgat
gtggcatttgtggcccagaaaaaagagaggcaaccgagggtgttgggaaaaatgaaaaga
tgggcggaagaggatgatagaggtacagaatggtggatgttgagaaagagtgagaagagg
gtgatgccacaaacaaagttgagggtcctttggcccagtgataaggagaggatgagagca
caaagaacgcacaagggaaggaggcaggtcaaattctcccaatcggacctcaaaaagatg
gcagaagtcgaggatcacattgtgcctgtcaggctggagttggagcacgaagggcaaaag
ttaaaggacactttcatgtggaactgctctgatactgttgttaccccggagctctttgcc
catatcctttgtgacgactttgccgttccccaccagcattttgcgtcccgtatcgtcgcc
gccatcgaagaacgtgtccgcgaatacaaggaccaagtgcttccgttgcttgagagtcgt
tccaaaggagattgtcaaggcaagcttgatcccgatggtgacgatgaagctcgtgcgatg
tgcgaagtattccgcaaagcgcgggaaggaagcggcattgacgacgaaatcaaaacagat
cctggagaggaggatggtgctgaccacatcaggattgttacctttgatgatcaagtgaat
ggcgttgatttagacgatgagcgaccatggacagtggaagaggccatgaccttagtgcca
aaagagctttcccacgatttgagaatattgatcaaggtggatataattatcgggacccag
aacttgacggatagctttgagtgggatcttcattcttcagtcactccagaagagtttgcg
gcatcttatgtcaccgagctgggcttgagtatggaatttgcgaccgctatcgcacacgac
attcgtgaacagatcatcatatatcagcgttctcttttccttgtcggccacactgatagc
tcttctgtcattcttgacgacgaagtgcgcggcgccttcttgcctcctgtcaccaccact
cttcgtaaagaagacattgccatggcatcgtacacacccatcttcagcgagcttggtcct
gatcaattagcattgctcgaatcgcagcgagagaaggagatgaagcgcaagaagagggct
ggccgcgctagacgcggtatcgtacttcctgagagggagcccattaagactcaacgcact
ttgctcaacaacctcggtcccaatggagttcctattttgttccaaaccgacaatgttccc
gttcgtgactccgctcctaccagtcgaaggcgtggtgcagcccttgccgcggaggcaaac
attaatctcctggctcaagatcttcctattcccgcatccggatctcctgcacctcattta
cctcatatgtctgctcgaggcaagcggcttggtaggcctcctaaaaacagagcgattagc
cccgtttctataagagaagagccccttgccaatggtggcactcccatcacaggtgatatc
aaaggtcggagaggatatctggatgagtcagtagatgagctgtccatcaatggggcattg
acggcatccgggaggaaaaaggccggtcatcataacagaattcccgattcaccttctgaa
ccctctactcctctctccggcaaggtagaaactctgccatcattaatacgtctcgagtcg
cagaccgatcagacttcgattctcacgaagcgcaaaagtaataatgatgttgatgaacga
ccactaaagtctgccaaacctgatgaagtcggagcgccgttcgcgatttccaaattccct
tctgacaataagatccaaaagaagaaaaggagctccgattcctctggaagcgatagcgac
agtgatagtgggagcgatagcgggagtgatgactcagactcaacatttggcgggagaaaa
gaaaggaaaaaagctcccgtgggcaggactgagacgcctgcagccaggtcctctgtggtg
ccagcggaaactccgggtttggccatgactgcgtcgcctggctcgggaaggaaagccatc
gaagttccgatgtggattcagagagctctgagtaatatgagagcaaaatatgctcgagac
tcgttcttagtcatccaaaagccccgaccagcggatcaaccagatgcacctccagagtgg
agagccaaatgtaatgactgcccaggtcgaatctacgctctaggtcccggtgagactctc
aacaattttgaagtccatctcaaaaacaagggccatatcggcaatagattggcaagggaa
gggaagactcagtaa
DBGET
integrated database retrieval system
