Cryptococcus decagattii: 89988545
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Entry
89988545 CDS
T10966
Symbol
IAS62_001771
Name
(RefSeq) uncharacterized protein
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
cdec Cryptococcus decagattii
Pathway
cdec03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cdec00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
89988545 (IAS62_001771)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cdec03019
]
89988545 (IAS62_001771)
Messenger RNA biogenesis [BR:
cdec03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
89988545 (IAS62_001771)
mRNA degradation factors
5'-3' decay
Decapping complex
89988545 (IAS62_001771)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAT1
Motif
Other DBs
NCBI-GeneID:
89988545
NCBI-ProteinID:
XP_064719713
UniProt:
A0ABZ2ARF4
LinkDB
All DBs
Position
3:complement(join(515470..515496,515550..516014,516063..516751,516804..517616,517668..517763,517819..517998,518053..518299))
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AA seq
838 aa
AA seq
DB search
MSAGFFGFDTALPEHRQSQHRPNDGAVTSKFQSASSVPNPFNLEAPEDEEMEVYTWGQGM
DKDTDEADELNDATFGVDINAIRGGQFSFGNEESVALPAKPSKQPQSQRGPIASTASRYR
PKAVADPFAFSEDDFYASRPVKKAQSKSKTKASVEPAWTKPAGQVTSWGTAPSSTVKPSL
ASKPAQGEAPGHIKSLEEIEAEFASMPAPSAAQVAFQAPTQLSGPPPANAVVTLEELERQ
MMEDVPPSLAEHQAQHQAPSREITPTQISGLAQSGYASQKAVLDNMFPDLGKGPGPVPPG
QQQGQTGQSPVPIGSSPEELARQEHFRKVFEAKVQAMSKYNNLMGSSDKDFITRIQLSQL
ATSDPYISDFYAQVFSAMERSRRAHESGQMDRPTVVQIAAGFGFGVGGPAGNRFGKMGQN
TMQKLSTQVKKLVESRTAHQKSANTAALQGALGRVTRGGAAAPRPVLAIPTNTKLENRPA
SHLNQSTGIQRPPLTRKQIMYALEGLYTDVLELEQFRREAPPSASVDEIEIWNAKCQVKV
DQIWAKLMVQEPIEVSNPHPFISLLNPPKGQRILGRIILQLPDQKIYTLLSLLVVKFHQL
DVVARAPPPPVTDASLLTKADRLDRAKREADTDGFLYNLVPAMDMAINKCKLGLLGGLLV
AAVQRLDVVKVASTRPGVVLFTALLSKAQSLIRAPSPDPLNPHSGAHPDQIELEHFPRQF
SVFLDALLPSLPDLFPSSIAAKHAFGPSAYLMSGENLPEKEGIEMERREAEVWALAAALA
VNSAEEEQTALVAALREKILHTVQGARNPMVSPVRAEMKLRNVNMFLNGLGLDAAMIE
NT seq
2517 nt
NT seq
+upstream
nt +downstream
nt
atgtcagccggattcttcggttttgacaccgcactccccgaacaccgtcagtcccagcat
cgtcccaatgacggagccgtcacttccaaattccaaagtgccagttctgtgcctaatccc
ttcaacctcgaggccccagaggatgaggaaatggaagtatacacttggggtcaagggatg
gacaaggataccgatgaggccgatgagctgaatgatgcaacgtttggcgtggacatcaat
gccatcaggggtgggcaattctcgttcgggaacgaagagtcagttgctttaccggctaag
ccatcaaaacagccccagtcgcaaagaggacccatcgcttcgactgcctcccggtaccga
cctaaagcagtggccgatccatttgccttttctgaagatgacttttatgcttctcgccct
gtcaaaaaggctcaatccaagtccaagacaaaggcctcggttgaacctgcttggacaaaa
ccagctggccaagtcaccagctggggaacggctccttcttctacagtaaagccatctctt
gcgtccaaacctgcacaaggggaagctcccggacacattaagagtcttgaggagattgaa
gccgagtttgcttcaatgcctgcgcccagcgctgcgcaggttgctttccaggctcccacg
caattatcaggaccgcctcctgcaaatgctgtcgtaacccttgaagagcttgagaggcaa
atgatggaagacgtccccccatctcttgccgaacatcaggcccaacatcaagcaccctct
cgagagattacccccactcagatttcaggccttgcccagtcagggtatgcttcgcagaaa
gctgtcctcgacaatatgtttcctgatcttggaaaaggtcctggtcccgtacctccaggt
cagcagcaaggccaaacagggcaaagcccagtcccaataggctctagtcccgaagagctc
gctcggcaggagcatttcaggaaggtttttgaagcgaaagtccaggcaatgtccaaatac
aataatcttatgggatcatcggacaaggactttattacccgcattcaattgtctcaactc
gctacttccgacccttatatttccgacttctacgcccaagttttttctgcgatggagaga
agccgccgggcgcatgagagtggtcagatggataggccgactgtagtacaaattgcagct
ggttttggcttcggcgtcggtggtcctgctggcaacagatttggaaaaatggggcaaaac
actatgcagaaattgtcgacacaggtcaagaaattggttgaaagtaggacagcgcaccag
aaatctgccaatactgctgctcttcagggcgctctcggccgagtcacacgaggtggtgct
gctgctcctcgtcccgttcttgccatccctacaaacaccaagctcgaaaaccgtcctgcg
tctcaccttaatcaatctacgggcatacagcgcccccctctcacccgcaaacaaatcatg
tatgccttagaaggcctctacaccgacgtccttgagcttgagcagttccgtagagaagca
ccgccttcagcctctgtggatgaaatcgaaatctggaacgctaaatgtcaagtaaaggtg
gatcagatctgggccaagcttatggttcaagagcctatcgaagtatcaaatccccatcca
tttatatcccttctcaacccgccaaaaggtcaacgtatcctcggccggatcatccttcaa
cttcctgatcagaagatttacaccttgctgtctctccttgttgtcaaattccatcaacta
gacgttgtggctcgtgctcctcctcctccagttacagacgccagcctcttaaccaaggct
gacagattagaccgcgctaagcgcgaggcagatacggacggcttcctgtacaacttggtg
cctgctatggacatggcgattaacaagtgtaagctgggccttttaggtggtctgttggtc
gctgctgtgcagagattggatgttgtgaaggttgcctccaccagacctggcgttgtcctg
ttcacagcactcttatcaaaagctcagtctcttatccgcgctccctctcccgatcctctc
aaccctcattccggcgcccatcctgaccagatagagcttgaacacttccctcgtcagttc
tcggtattccttgatgctcttttaccttctttgccagatcttttcccgtcatctatcgct
gcgaagcatgcctttggcccctcggcgtacttgatgtcgggggagaatcttcccgaaaag
gagggcatagagatggagaggcgagaagctgaagtctgggcactggctgctgctttggcc
gttaattcagcagaagaggagcagacagcattggtcgctgctttgagggaaaagattctt
catactgtccagggtgccagaaaccctatggttagccccgtcagagcggaaatgaagctg
aggaatgtgaacatgttcttgaacggtctcggtttggatgcggcgatgattgaataa
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