KEGG   Cryptococcus decagattii: 89988839
Entry
89988839          CDS       T10966                                 
Symbol
IAS62_002065
Name
(RefSeq) small nuclear ribonucleoprotein Sm D2
  KO
K11096  small nuclear ribonucleoprotein D2
Organism
cdec  Cryptococcus decagattii
Pathway
cdec03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cdec00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    89988839 (IAS62_002065)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cdec03041]
    89988839 (IAS62_002065)
   03032 DNA replication proteins [BR:cdec03032]
    89988839 (IAS62_002065)
Spliceosome [BR:cdec03041]
 Complex A
  U1 snRNP components
   Sm proteins
    89988839 (IAS62_002065)
  U2 snRNP components
    89988839 (IAS62_002065)
 Complex B
  U1 snRNP components
    89988839 (IAS62_002065)
  U4/U6.U5 tri-snRNP components
    89988839 (IAS62_002065)
 Complex C
  U2 snRNP components
    89988839 (IAS62_002065)
DNA replication proteins [BR:cdec03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     89988839 (IAS62_002065)
SSDB
Motif
Pfam: LSM Curto_V2 Hfq
Other DBs
NCBI-GeneID: 89988839
NCBI-ProteinID: XP_064720004
UniProt: A0ABZ2AQI1
LinkDB
Position
3:complement(join(1267485..1267504,1267561..1267595,1267649..1267710,1267793..1268006,1268064..1268239))
AA seq 168 aa
MPKSPNFPQLSLSSTSEVKQPGNYDHACIHLKQSRHSPVHPEGPRHFRSASTAHRETMSQ
YAHVPKSELDEAQIRELEEYEISQGPLSVLQQSVRNSSQVLISLRNNKKLLARVKAFDRH
CNMVLENVKEMWTETPKGKGKKPVNKDRFISKMFLRGDSVILVLRNAA
NT seq 507 nt   +upstreamnt  +downstreamnt
atgcctaaatcgccgaattttccgcaactaagtctgtcgtccacctctgaagtcaagcaa
ccgggcaactatgaccatgcatgcatccatctcaagcagtcgcggcattcgccagttcat
cccgaaggtccccgtcacttccgctcagcttccactgcccatcgtgaaactatgagtcaa
tacgcccacgtccctaaatccgagcttgacgaagcccaaatacgagaacttgaagagtac
gaaatctctcaaggcccgttatctgtccttcaacaatccgtccgcaactcttctcaagtc
cttatctcattgcggaataacaagaaacttctggcgagagtgaaggcgttcgataggcat
tgcaacatggttttggagaacgtaaaggaaatgtggacggagacaccaaagggcaaaggg
aaaaagcctgtgaacaaggaccgtttcatctcaaaaatgtttcttcgaggcgattctgta
atccttgtccttcgcaatgcggcatag

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